CB610815

Overview
NameCB610815
Unique NameCB610815
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 1.288e-27
Identity = 63/106 (59.43%), Postives = 74/106 (69.81%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCK 495
            MST G+VI CKAAV WE  K   IEDV+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD  IP +  +C  C+ CK
Sbjct:    1 MSTAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCK 105          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.682e-27
Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 1
Query:  181 STGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCK 495
            +T G+VI CKAAV W P + L IE+++VAPP+  EVR+KI+ T +C +D +  SG   +  FP ILGHEAAG+VESVGEGVT+ +PGD  IP +  +C +C+ CK
Sbjct:    1 ATAGKVIKCKAAVCWGPKQPLSIEEIEVAPPKRHEVRVKIVATGICRSDDHVISGALSDMKFPVILGHEAAGVVESVGEGVTKFKPGDKVIPLFVPQCGECRCCK 105          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.682e-27
Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCKY 498
            MST G+VI CKAAV W+ NK   IE+V+VAPP+A EVRIK++ T +C +D +  +G     L P ILGHEAAGIVES+GEGVT V+PGD  IP +  +C  C+ CK+
Sbjct:    1 MSTAGKVIKCKAAVLWQLNKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHAVTGSIAVPL-PVILGHEAAGIVESIGEGVTTVKPGDKVIPLFTPQCGKCRICKH 106          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.682e-27
Identity = 63/106 (59.43%), Postives = 74/106 (69.81%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCK 495
            MST G+VI CKAAV WE  K   IEDV+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD  IP +  +C  C+ CK
Sbjct:    1 MSTAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCK 105          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.197e-27
Identity = 60/104 (57.69%), Postives = 74/104 (71.15%), Query Frame = 1
Query:  181 STGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFC 492
            ST G+VI CKAAV WEP K   IE+V+VAPP+A EVR+KI+ T +C +D +  SG      FP ILGHEAAG+VESVGEGVT V+PGD  IP +  +C +C  C
Sbjct:    1 STAGKVIKCKAAVLWEPKKPFSIEEVEVAPPKAHEVRVKIIATGICRSDDHVISGVLVMP-FPIILGHEAAGVVESVGEGVTSVKPGDKVIPLFVPQCGECSVC 103          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.870e-27
Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 1
Query:  181 STGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCK 495
            ST G+VI CKAA+AWE NK L IE ++VAPP+A EVRIKIL T +C +D +  SG     L P +LGHEAAG+VESVGEGVT V+PGD  IP +  +C  C+ C+
Sbjct:    1 STAGKVIKCKAAIAWELNKPLSIEQIEVAPPKAHEVRIKILATGVCRSDEHVISGAFRMPL-PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFAPQCGKCRACQ 104          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 3.748e-27
Identity = 60/107 (56.07%), Postives = 76/107 (71.03%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCKY 498
            MST G+VI C+AAV WE NK   IE+V+VAPP+A EVRIKI+ T +C +D +  +G     L P ILGHEA GIVES+GEGVT V+PGD  IP +  +C  C+ CK+
Sbjct:    1 MSTAGKVIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKH 106          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 3.748e-27
Identity = 60/107 (56.07%), Postives = 76/107 (71.03%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCKY 498
            MST G+VI C+AAV WE NK   IE+V+VAPP+A EVRIKI+ T +C +D +  +G     L P ILGHEA GIVES+GEGVT V+PGD  IP +  +C  C+ CK+
Sbjct:    1 MSTAGKVIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKH 106          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 4.895e-27
Identity = 59/105 (56.19%), Postives = 70/105 (66.67%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFC 492
            M T G+VI CKAA+AWE  K L IE+V+VAPP+A EVR++I    LC +D +  + K      P ILGHE AGIVESVG GVT V+PGD  IP Y   C  CKFC
Sbjct:    1 MGTKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQINAAGLCRSDTHVINPKFEGAFLPVILGHEGAGIVESVGPGVTNVKPGDKVIPLYIPHCKKCKFC 105          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 4.895e-27
Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = 1
Query:  181 STGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCKY 498
            ST G+VI CKAAV WEP K   I +++VAPP+A EVRIKIL + +C +D +  SG      FP ILGHEAAG+VESVGEGVT ++PGD  IP +  +C +C  C++
Sbjct:    1 STAGKVIKCKAAVVWEPKKPFSIVEIEVAPPKAHEVRIKILASGICRSDDHVLSGALKVN-FPIILGHEAAGVVESVGEGVTSMKPGDKVIPIFLPQCGECNSCRH 105          
The following BLAST results are available for this feature:
BLAST of CB610815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
ADH1B_PANTR1.288e-2759.43Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1_RANPE1.682e-2753.33Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADH1_RABIT1.682e-2756.07Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
ADH1B_HUMAN1.682e-2759.43Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADH1_STRCA2.197e-2757.69Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1_NAJNA2.870e-2758.10Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1_GEOBU3.748e-2756.07Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH... [more]
ADH1_GEOAT3.748e-2756.07Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
ADHP_RABIT4.895e-2756.19Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADH1B_UROHA4.895e-2754.72Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_C02 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610815 ID=CB610815; Name=CB610815; organism=Citrus sinensis; type=EST; length=538bp
GGGGGGTGTGTTTGGCAGATTCAATAATAGAGGGAGCTACTTTAGAGATC
NCTCACCTCTGTTGCCGGCAGCCACTCTCAGATCGTGTCACGTCCCTTTT
GAATAATAATATCTAACTGCATCTACTCGTTTCTTTTTGTGGTCTGTTTT
TCATTCTCATTTTCATTGTCAGCAGCCATGTCTACTGGAGGTCAAGTCAT
CACATGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTGGTGATTG
AGGATGTGCAGGTTGCTCCGCCACAGGCTGGCGAGGTCCGAATCAAGATT
CTCTTCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCGGCAAGGA
TCCTGAAGGTCTCTTCCCCTGTATCCTAGGTCATGAGGCTGCTGGGATTG
TGGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGATCATGGC
ATCCCTTGTTACCAGGCAGAATGCCCAGATTGCAAGTTTTGCAAGTACTG
GAAAGACTAACCTCTAGGGGTAAGGTTAGNGGTGCCAC
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