CB610815

Overview
NameCB610815
Unique NameCB610815
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:22..558. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 9.231e-26
Identity = 59/107 (55.14%), Postives = 73/107 (68.22%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCKY 498
            MST G+VI CKAAV WE  K   IE+V+VAPP+A EVRIK++   +C +D +  SG     L P I GHEAAGIVES+GEGVT V+PGD  IP +  +C  C  CK+
Sbjct:    1 MSTAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKH 106          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 1.206e-25
Identity = 58/106 (54.72%), Postives = 73/106 (68.87%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCK 495
            M T G+ ITCKAAVAWEP+K L +E + VAPP+A EVRIKIL + +C +D+       P   FP ILGHEA G+VES+G GVT V+PGD  IP +  +C  C+ CK
Sbjct:    1 MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACK 105          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.206e-25
Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCK 495
            M T G+VI CKAAV WE  +   IE+++VAPP+  EVRIKIL T +C TD +   G      FP I+GHEA GIVES+GEGVT V+PGD  IP +  +C +C  C+
Sbjct:    1 MGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKG-TMVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACR 105          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.206e-25
Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFC 492
            MST G+VI CKAAV WE NK   +E+V+VAPP+A EVRIKI+ T +C +D +  +G      FP ILGHEAAG++ESVGE VT ++PGD  IP +  +C +C+ C
Sbjct:    1 MSTVGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPIILGHEAAGVIESVGEKVTSLKPGDAVIPLFVPQCGECRSC 104          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.575e-25
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFC 492
            M T G+VI CKAAV W  N+   IE+++VAPP+A EVR+KIL T +C TD +   G      FP I+GHEA G+VESVGEGVT V+PGD  IP +  +C +C  C
Sbjct:    1 MGTAGKVIKCKAAVLWGVNQPFSIEEIEVAPPKAKEVRVKILATGICRTDDHIIKG-SMVSKFPVIVGHEAVGVVESVGEGVTTVRPGDKVIPLFLPQCRECNAC 104          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.057e-25
Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query:  193 QVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFC 492
            QVITC AAVAW   + LV+E+V+V+PPQ  E+RIK++ T+LC +D   W   + + L P I GHEAAGIVES+GEGVTE + GDH +  +  EC  C+ C
Sbjct:   12 QVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAW---ESQSLLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHC 108          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH6_HUMAN (Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.057e-25
Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFC 492
            M T GQVI CKAA+ W+P     IE+V+VAPP+A EVRIK++ T LC T+      K  + L+P ILGHE AGIVES+GEGV+ V+PGD  I  +  +C +C  C
Sbjct:    1 MCTTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVATGLCGTEMKVLGSKHLDLLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSC 105          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.686e-25
Identity = 54/95 (56.84%), Postives = 65/95 (68.42%), Query Frame = 1
Query:  208 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFC 492
            +AAVA E  K L I +V +  P+AGEV ++I  T +CHTD +T SG DPEG+FP ILGHE AG+V  VG GVT V+PGDH IP Y  EC  C  C
Sbjct:    4 RAAVAVEAGKPLEIMEVNLEGPKAGEVMVEIKATGICHTDEFTLSGADPEGMFPAILGHEGAGVVVEVGPGVTSVKPGDHVIPLYTPECRQCPSC 98          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.508e-25
Identity = 57/104 (54.81%), Postives = 74/104 (71.15%), Query Frame = 1
Query:  181 STGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFC 492
            ST G+VI CKAAV WE NK   +E+V+VAPP+A EVRIKI+ T +C +D +  +G      FP ILGHEAAG+VESVGE VT ++PGD  IP +  +C +C+ C
Sbjct:    1 STAGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPVILGHEAAGVVESVGEKVTLLKPGDAVIPLFVPQCGECRSC 103          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 4.581e-25
Identity = 57/106 (53.77%), Postives = 71/106 (66.98%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCK 495
            M T G+VI CKAAV W  N+   IED++VAPP+A EVR+KIL T +C TD +   G      FP I+GHEA GIVESVGE VT V+PGD  IP +  +C +C  C+
Sbjct:    1 MDTAGKVIKCKAAVLWGTNQPFSIEDIEVAPPKAKEVRVKILATGICGTDDHVIKG-TMVSKFPVIVGHEAVGIVESVGEEVTTVRPGDKVIPLFLPQCRECNPCR 105          
The following BLAST results are available for this feature:
BLAST of CB610815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
ADH1S_HORSE9.231e-2655.14Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADH8_RANPE1.206e-2554.72NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
ADH7_HUMAN1.206e-2552.83Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
ADH1_CHICK1.206e-2554.29Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
ADH7_MOUSE1.575e-2553.33Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
ADHL6_ARATH2.057e-2553.00Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADH6_HUMAN2.057e-2552.38Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE... [more]
ADHI_RHOS42.686e-2556.84Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]
ADH1_COTJA3.508e-2554.81Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH7_RAT4.581e-2553.77Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_C02 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610815 ID=CB610815; Name=CB610815; organism=Citrus sinensis; type=EST; length=538bp
GGGGGGTGTGTTTGGCAGATTCAATAATAGAGGGAGCTACTTTAGAGATC
NCTCACCTCTGTTGCCGGCAGCCACTCTCAGATCGTGTCACGTCCCTTTT
GAATAATAATATCTAACTGCATCTACTCGTTTCTTTTTGTGGTCTGTTTT
TCATTCTCATTTTCATTGTCAGCAGCCATGTCTACTGGAGGTCAAGTCAT
CACATGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTGGTGATTG
AGGATGTGCAGGTTGCTCCGCCACAGGCTGGCGAGGTCCGAATCAAGATT
CTCTTCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCGGCAAGGA
TCCTGAAGGTCTCTTCCCCTGTATCCTAGGTCATGAGGCTGCTGGGATTG
TGGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGATCATGGC
ATCCCTTGTTACCAGGCAGAATGCCCAGATTGCAAGTTTTGCAAGTACTG
GAAAGACTAACCTCTAGGGGTAAGGTTAGNGGTGCCAC
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