CB610981
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 80/212 (37.74%), Postives = 125/212 (58.96%), Query Frame = 3 Query: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG-QETIKLAIRALLEVVES--GGKNIKVAVM 698 ++Y ++T FSP G L Q+E+AL AV G ++G++ + + + EKK L D SV+KI SL +I + +G+ D RVL+ ++R + Q + ++ + V + R A + Q++TQSGGVRPFG+S LI G+D P LYQ DPSG++ +WKA+A G+N ++ + FLEK E + I AI L E E NI++ ++ Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYD--DNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGII 213
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 80/212 (37.74%), Postives = 125/212 (58.96%), Query Frame = 3 Query: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG-QETIKLAIRALLEVVES--GGKNIKVAVM 698 ++Y ++T FSP G L Q+E+AL AV G ++G++ + + + EKK L D SV+KI SL +I + +G+ D RVL+ ++R + Q + ++ + V + R A + Q++TQSGGVRPFG+S LI G+D P LYQ DPSG++ +WKA+A G+N ++ + FLEK E + I AI L E E NI++ ++ Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYD--DNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGII 213
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34 Identity = 87/213 (40.85%), Postives = 128/213 (60.09%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQS--HRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK-ETSGQETIKLAIRALLEVVES--GGKNIKVAVM 698 +Y ++T FSP+G L Q+EYAL AV G +VG++ TD + L EKK T +L S+ K+ ++ I + +G+ D RVL++++R Q+ ++ E P T + + + IA + Q+ TQSGGVRPFG+S L+ G D PSLYQ DPSGT+ AWKA A G++S + + FLEK E + + AI AL E E NI++AV+ Sbjct: 4 KYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPT-KILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEKG--PSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDAVHTAILALKETFEGELTEDNIEIAVV 213
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_NEUCR (Probable proteasome subunit alpha type-2 OS=Neurospora crassa GN=B14D6.510 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34 Identity = 81/212 (38.21%), Postives = 126/212 (59.43%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRAR-IECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE-TSGQETIKLAIRALLEVVES--GGKNIKVAVM 698 RY ++T FSP G L Q+EYAL AV +G A+G++ T+ I L EKKS+ L D S+ KI + +I + +G+ D RVL++RAR + ++ + + + +A + Q+ TQSGGVRP+G+S LI G+D G P LYQ DPSG++ WKA A G+N+ + + FLEK E ++ + +A+ L E +E G I++ ++ Sbjct: 4 RYSFSLTTFSPSGKLVQIEYALNAVNQGVTALGIKATNGIVLATEKKSSSPLADPSSLSKISLITPNIGMVYSGMGPDYRVLVDRARKVSHTGYKRIYNEYPPTRILVQDVARVMQEATQSGGVRPYGVSLLIAGWD--EGGPMLYQVDPSGSYFPWKATAIGKNATTAKTFLEKRYTEGLELEDAVHIALLTLKETIEGEMNGDTIEIGIV 213
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.187e-34 Identity = 79/209 (37.80%), Postives = 125/209 (59.81%), Query Frame = 3 Query: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG-QETIKLAIRALLEVVES--GGKNIKV 689 ++Y ++T FSP G L Q+E+AL AV G ++G++ ++ + + EKK L D SV+KI L +I + +G+ D RVL+ ++R + + + ++P+ V + R A + Q++TQSGGVRPFG+S L+ G+D P LYQ DPSG++ +WKA+A G+N ++ + FLEK E + I AI L E E KNI++ Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKG--PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEI 210
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA5_ENTHI (Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34 Identity = 83/214 (38.79%), Postives = 128/214 (59.81%), Query Frame = 3 Query: 81 DRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-----VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFL-EKNCKETSGQETIKLAIRALLEVVES--GGKNIKVAVM 698 D + FS +G LFQVEYA EA++ G+ +G++ + + L VEK+ + L S+ KI+ +D+HI A +GL ADAR LI+ AR+E Q+HR ++P+ VE + + I+ L ++ + RPFG++ LI G D TG P L+QTDPSG F + A ATG + + + L EK K + +E LA+ L +V+E KN++VA++ Sbjct: 9 DHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGSSIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALLIAGVDE-TG-PRLFQTDPSGMFIEFYAKATGAGTEAAQSILHEKYNKSMTLREAEILALSTLKQVMEEKLNSKNVEVALV 220
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34 Identity = 82/198 (41.41%), Postives = 119/198 (60.10%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQETIKLAIRALLEVVESG 671 Y ++T FSP G L Q+E+AL+A G +A+G++ + + L EKK L D SV+KI + +I L AG+ D+RVLI +AR E + + ++ + V + R +A + Q++TQSGGVRPFG+S L+ GFD P LYQ DPSG++ AWKA A G+N S + FLE K S I+ AI+ L ++ G Sbjct: 5 YSFSLTTFSPSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLH-SLVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEKG--PHLYQVDPSGSYFAWKATAIGKNMVSSKTFLE---KRYSDDLEIEDAIQTALITIKEG 196
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34 Identity = 79/209 (37.80%), Postives = 124/209 (59.33%), Query Frame = 3 Query: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG-QETIKLAIRALLEVVES--GGKNIKV 689 ++Y ++T FSP G L Q+E+AL AV G ++G++ ++ + + EKK L D SV+KI L +I +G+ D RVL+ ++R + + + ++P+ V + R A + Q++TQSGGVRPFG+S L+ G+D P LYQ DPSG++ +WKA+A G+N ++ + FLEK E + I AI L E E KNI++ Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKG--PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEI 210
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4_CAEEL (Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 7.101e-34 Identity = 77/211 (36.49%), Postives = 125/211 (59.24%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQETIKLAIRALLEV--VESGGKNIKVAVM 698 RYD T+FSP+G L+QVEYA+EA+ +G+ ++ I + E+K+ KL DS K+ L ++I+ AG+ ADA +LIN R S+R + + + VE + + + +Q+YTQ GG RPFG+S L +G+D + G LYQ+DPSG ++ WKA G N + L++ K + +E +LAI+ L + V+ + +++AV+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGY-QLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSPNLEEAKQLAIKVLWKTLDVKLASEKVEMAVL 213
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.274e-34 Identity = 87/218 (39.91%), Postives = 128/218 (58.72%), Query Frame = 3 Query: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG------VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFL-EKNCKETSGQETIKLAIRALLEVVESG--GKNIKVAVM 698 + YDR + FSP+G LFQVEYALEA++ G +GV+ + + L VEK+ T L + S++K+V +D H+ A +GL ADAR +I+ ARIE Q+HR +P+ VE + I L ++ ++ RPFG++ LI G D PSLY +DPSGTF+ + A A G S + L EK K + E KLA+ L +V+E N+++AV+ Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYALEAIKLG---IGVQCEEGVVLAVEKRLTSPLLEPSSIQKVVEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEKG--PSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYSKTLTIAECQKLALTTLKQVMEEAITTTNVELAVI 218 The following BLAST results are available for this feature:
BLAST of CB610981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610981 ID=CB610981; Name=CB610981; organism=Citrus sinensis; type=EST; length=702bpback to top |