CB610981

Overview
NameCB610981
Unique NameCB610981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34
Identity = 80/212 (37.74%), Postives = 125/212 (58.96%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG-QETIKLAIRALLEVVES--GGKNIKVAVM 698
            ++Y  ++T FSP G L Q+E+AL AV  G  ++G++  + + +  EKK    L D  SV+KI SL  +I +  +G+  D RVL+ ++R + Q +    ++ + V  + R  A + Q++TQSGGVRPFG+S LI G+D     P LYQ DPSG++ +WKA+A G+N ++ + FLEK   E     + I  AI  L E  E      NI++ ++
Sbjct:    4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYD--DNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGII 213          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34
Identity = 80/212 (37.74%), Postives = 125/212 (58.96%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG-QETIKLAIRALLEVVES--GGKNIKVAVM 698
            ++Y  ++T FSP G L Q+E+AL AV  G  ++G++  + + +  EKK    L D  SV+KI SL  +I +  +G+  D RVL+ ++R + Q +    ++ + V  + R  A + Q++TQSGGVRPFG+S LI G+D     P LYQ DPSG++ +WKA+A G+N ++ + FLEK   E     + I  AI  L E  E      NI++ ++
Sbjct:    4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYD--DNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGII 213          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34
Identity = 87/213 (40.85%), Postives = 128/213 (60.09%), Query Frame = 3
Query:   75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQS--HRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK-ETSGQETIKLAIRALLEVVES--GGKNIKVAVM 698
            +Y  ++T FSP+G L Q+EYAL AV  G  +VG++ TD + L  EKK T +L    S+ K+ ++   I +  +G+  D RVL++++R   Q+   ++  E P T + + + IA + Q+ TQSGGVRPFG+S L+ G D     PSLYQ DPSGT+ AWKA A G++S + + FLEK    E    + +  AI AL E  E      NI++AV+
Sbjct:    4 KYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPT-KILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEKG--PSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDAVHTAILALKETFEGELTEDNIEIAVV 213          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_NEUCR (Probable proteasome subunit alpha type-2 OS=Neurospora crassa GN=B14D6.510 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34
Identity = 81/212 (38.21%), Postives = 126/212 (59.43%), Query Frame = 3
Query:   75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRAR-IECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE-TSGQETIKLAIRALLEVVES--GGKNIKVAVM 698
            RY  ++T FSP G L Q+EYAL AV +G  A+G++ T+ I L  EKKS+  L D  S+ KI  +  +I +  +G+  D RVL++RAR +    ++    +      + + +A + Q+ TQSGGVRP+G+S LI G+D   G P LYQ DPSG++  WKA A G+N+ + + FLEK   E    ++ + +A+  L E +E    G  I++ ++
Sbjct:    4 RYSFSLTTFSPSGKLVQIEYALNAVNQGVTALGIKATNGIVLATEKKSSSPLADPSSLSKISLITPNIGMVYSGMGPDYRVLVDRARKVSHTGYKRIYNEYPPTRILVQDVARVMQEATQSGGVRPYGVSLLIAGWD--EGGPMLYQVDPSGSYFPWKATAIGKNATTAKTFLEKRYTEGLELEDAVHIALLTLKETIEGEMNGDTIEIGIV 213          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.187e-34
Identity = 79/209 (37.80%), Postives = 125/209 (59.81%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG-QETIKLAIRALLEVVES--GGKNIKV 689
            ++Y  ++T FSP G L Q+E+AL AV  G  ++G++ ++ + +  EKK    L D  SV+KI  L  +I +  +G+  D RVL+ ++R + + +    ++P+ V  + R  A + Q++TQSGGVRPFG+S L+ G+D     P LYQ DPSG++ +WKA+A G+N ++ + FLEK   E     + I  AI  L E  E     KNI++
Sbjct:    4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKG--PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEI 210          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA5_ENTHI (Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34
Identity = 83/214 (38.79%), Postives = 128/214 (59.81%), Query Frame = 3
Query:   81 DRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-----VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFL-EKNCKETSGQETIKLAIRALLEVVES--GGKNIKVAVM 698
            D  +  FS +G LFQVEYA EA++ G+  +G++  + + L VEK+ +  L    S+ KI+ +D+HI  A +GL ADAR LI+ AR+E Q+HR   ++P+ VE + + I+ L  ++ +         RPFG++ LI G D  TG P L+QTDPSG F  + A ATG  + + +  L EK  K  + +E   LA+  L +V+E     KN++VA++
Sbjct:    9 DHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGSSIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALLIAGVDE-TG-PRLFQTDPSGMFIEFYAKATGAGTEAAQSILHEKYNKSMTLREAEILALSTLKQVMEEKLNSKNVEVALV 220          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34
Identity = 82/198 (41.41%), Postives = 119/198 (60.10%), Query Frame = 3
Query:   78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQETIKLAIRALLEVVESG 671
            Y  ++T FSP G L Q+E+AL+A   G +A+G++  + + L  EKK    L D  SV+KI  +  +I L  AG+  D+RVLI +AR E + +    ++ + V  + R +A + Q++TQSGGVRPFG+S L+ GFD     P LYQ DPSG++ AWKA A G+N  S + FLE   K  S    I+ AI+  L  ++ G
Sbjct:    5 YSFSLTTFSPSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLH-SLVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEKG--PHLYQVDPSGSYFAWKATAIGKNMVSSKTFLE---KRYSDDLEIEDAIQTALITIKEG 196          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34
Identity = 79/209 (37.80%), Postives = 124/209 (59.33%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG-QETIKLAIRALLEVVES--GGKNIKV 689
            ++Y  ++T FSP G L Q+E+AL AV  G  ++G++ ++ + +  EKK    L D  SV+KI  L  +I    +G+  D RVL+ ++R + + +    ++P+ V  + R  A + Q++TQSGGVRPFG+S L+ G+D     P LYQ DPSG++ +WKA+A G+N ++ + FLEK   E     + I  AI  L E  E     KNI++
Sbjct:    4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKG--PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEI 210          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4_CAEEL (Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.101e-34
Identity = 77/211 (36.49%), Postives = 125/211 (59.24%), Query Frame = 3
Query:   75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQETIKLAIRALLEV--VESGGKNIKVAVM 698
            RYD   T+FSP+G L+QVEYA+EA+      +G+  ++ I +  E+K+  KL  DS    K+  L ++I+   AG+ ADA +LIN  R    S+R +  + + VE + + +   +Q+YTQ GG RPFG+S L +G+D + G   LYQ+DPSG ++ WKA   G N  +    L++  K  + +E  +LAI+ L +   V+   + +++AV+
Sbjct:    4 RYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGY-QLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSPNLEEAKQLAIKVLWKTLDVKLASEKVEMAVL 213          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.274e-34
Identity = 87/218 (39.91%), Postives = 128/218 (58.72%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG------VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFL-EKNCKETSGQETIKLAIRALLEVVESG--GKNIKVAVM 698
            + YDR +  FSP+G LFQVEYALEA++ G   +GV+  + + L VEK+ T  L +  S++K+V +D H+  A +GL ADAR +I+ ARIE Q+HR    +P+ VE   + I  L  ++ ++         RPFG++ LI G D     PSLY +DPSGTF+ + A A G  S   +  L EK  K  +  E  KLA+  L +V+E      N+++AV+
Sbjct:    6 SEYDRGVNTFSPEGRLFQVEYALEAIKLG---IGVQCEEGVVLAVEKRLTSPLLEPSSIQKVVEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEKG--PSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYSKTLTIAECQKLALTTLKQVMEEAITTTNVELAVI 218          
The following BLAST results are available for this feature:
BLAST of CB610981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
PSA2_ORYSJ1.869e-3437.74Proteasome subunit alpha type-2 OS=Oryza sativa su... [more]
PSA2_ORYSI1.869e-3437.74Proteasome subunit alpha type-2 OS=Oryza sativa su... [more]
PSA2_SCHPO2.440e-3440.85Probable proteasome subunit alpha type-2 OS=Schizo... [more]
PSA2_NEUCR2.440e-3438.21Probable proteasome subunit alpha type-2 OS=Neuros... [more]
PSA2A_ARATH3.187e-3437.80Proteasome subunit alpha type-2-A OS=Arabidopsis t... [more]
PSA5_ENTHI5.437e-3438.79Proteasome subunit alpha type-5 OS=Entamoeba histo... [more]
PSA2_DICDI5.437e-3441.41Proteasome subunit alpha type-2 OS=Dictyostelium d... [more]
PSA2B_ARATH5.437e-3437.80Proteasome subunit alpha type-2-B OS=Arabidopsis t... [more]
PSA4_CAEEL7.101e-3436.49Proteasome subunit alpha type-4 OS=Caenorhabditis ... [more]
PSA5_DICDI9.274e-3439.91Proteasome subunit alpha type-5 OS=Dictyostelium d... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_F06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610981 ID=CB610981; Name=CB610981; organism=Citrus sinensis; type=EST; length=702bp
GGGGAAAGAAACTCGAATCAGAGAGACGCAGAAATCGATCGAGAAGAGGA
AAATTAGAGAGATTTGACATGGCGAGATACGATCGAGCAATCACTGTATT
TTCACCGGATGGCCACCTGTTCCAAGTGGAATACGCACTAGAGGCCGTAC
GCAAAGGCAACGCCGCCGTCGGCGTGCGCGGCACCGACACCATCGCTCTT
GGCGTCGAAAAGAAATCCACTGTCAAGCTTCAGGACTCCAGATCAGTGAG
GAAGATTGTCAGCTTGGATAATCATATTGCATTGGCCTGTGCTGGACTTA
AAGCAGATGCTCGTGTACTGATAAACAGGGCTCGAATAGAATGTCAGAGC
CACAGGCTGACTGTTGAGGACCCAGTAACTGTTGAGTACATCACTCGTTA
CATTGCAGGTCTCCAGCAGAAGTACACACAAAGCGGTGGTGTGAGACCAT
TTGGTCTTTCTACTCTGATTGTGGGCTTTGATCCATACACTGGCGTGCCA
TCACTATATCAGACAGATCCTTCTGGGACATTTTCTGCTTGGAAAGCTAA
TGCAACTGGGAGAAACTCTAATTCAATGAGGGAGTTTCTGGAGAAAAACT
GTAAGGAAACTTCCGGGCAAGAAACTATAAAGCTTGCAATTCGGGCATTA
CTTGAGGTTGTTGAGAGTGGGGGCAAAAACATAAAAGTTGCTGTGATGAT
CN
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