CB610981
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4_SCHPO (Probable proteasome subunit alpha type-4 OS=Schizosaccharomyces pombe GN=SPAC13C5.01c PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.274e-34 Identity = 78/199 (39.20%), Postives = 118/199 (59.30%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG-QETIKLAIRALLEVVES 668 YD T+FSP+G L+QVEYALEA+ A+G+ D I L EKK T KL + S K+ + +++ A AGL ADA +LIN AR Q + T + + E + R + L+Q YTQ GG+RPFG+S L G+D G L+Q++PSG + +W+AN+ G NS S++ + + K+ E +A++ L + ++S Sbjct: 5 YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFLYAGWDHIRGY-QLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASAMAVKFLSKTLDS 202
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4_HUMAN (Proteasome subunit alpha type-4 OS=Homo sapiens GN=PSMA4 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33 Identity = 75/197 (38.07%), Postives = 116/197 (58.88%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSV-RKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQETIKLAIRALLEVV 662 RYD T+FSP+G L+QVEYA+EA+ +G+ D + L E+++ KL D KI L+ +A + AG+ +DA VL N R+ Q + L ++P+ E + + ++Q YTQ GG RPFG+S L +G+D + G LYQ+DPSG + WKA G NS + L+++ KE G+ T+K A+ ++V+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGF-QLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKE--GEMTLKSALALAIKVL 197
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4_BOVIN (Proteasome subunit alpha type-4 OS=Bos taurus GN=PSMA4 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33 Identity = 75/197 (38.07%), Postives = 116/197 (58.88%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSV-RKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQETIKLAIRALLEVV 662 RYD T+FSP+G L+QVEYA+EA+ +G+ D + L E+++ KL D KI L+ +A + AG+ +DA VL N R+ Q + L ++P+ E + + ++Q YTQ GG RPFG+S L +G+D + G LYQ+DPSG + WKA G NS + L+++ KE G+ T+K A+ ++V+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGF-QLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKE--GEMTLKSALALAIKVL 197
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4_RAT (Proteasome subunit alpha type-4 OS=Rattus norvegicus GN=Psma4 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.066e-33 Identity = 75/197 (38.07%), Postives = 116/197 (58.88%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSV-RKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQETIKLAIRALLEVV 662 RYD T+FSP+G L+QVEYA+EA+ +G+ D + L E+++ KL D KI L+ +A + AG+ +DA VL N R+ Q + L ++P+ E + + ++Q YTQ GG RPFG+S L +G+D + G LYQ+DPSG + WKA G NS + L+++ KE G+ T+K A+ ++V+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGF-QLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKE--GEMTLKSALALAVKVL 197
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4_MOUSE (Proteasome subunit alpha type-4 OS=Mus musculus GN=Psma4 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.066e-33 Identity = 75/197 (38.07%), Postives = 116/197 (58.88%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSV-RKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQETIKLAIRALLEVV 662 RYD T+FSP+G L+QVEYA+EA+ +G+ D + L E+++ KL D KI L+ +A + AG+ +DA VL N R+ Q + L ++P+ E + + ++Q YTQ GG RPFG+S L +G+D + G LYQ+DPSG + WKA G NS + L+++ KE G+ T+K A+ ++V+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGF-QLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKE--GEMTLKSALALAVKVL 197
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_CAEEL (Proteasome subunit alpha type-2 OS=Caenorhabditis elegans GN=pas-2 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.698e-33 Identity = 85/211 (40.28%), Postives = 117/211 (55.45%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRAR-IECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKET----SGQETIKLAIRALLEVVESGGKNIKVAV 695 Y ++T FSP G L Q+EYAL AV+ G +VG+R D + L E +V D V +I HI +G+ D R+L+ +AR I + + E+ T++ +T IA + Q+YTQSGGVRPFG S LI G+D G P L+Q DPSG + AWKA A G+N + + FLEK E G T L +R + V N++VAV Sbjct: 5 YGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVGSVLTDDQPKVEQI---SKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTD-IAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALELDDGIHTALLTLRESFD-VGMNENNVEVAV 210
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 3.524e-33 Identity = 82/212 (38.68%), Postives = 118/212 (55.66%), Query Frame = 3 Query: 72 ARYDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG---QETIKLAIRALLEVVESGGKNIKVAV 695 A YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D++ + +KK KL D SV + + +I L G+ ADAR L+ +AR + R T + V+ + ++IA Q YTQ +RP G+ +++G D G P LY+ DP+G F KA + G FLEK KE ET++ AI AL V++ K ++ V Sbjct: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENG-PLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEV 217
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4_MACFA (Proteasome subunit alpha type-4 OS=Macaca fascicularis GN=PSMA4 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.524e-33 Identity = 74/197 (37.56%), Postives = 116/197 (58.88%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSV-RKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQETIKLAIRALLEVV 662 RYD T+FSP+G L+QVEYA+EA+ +G+ D + L E+++ KL D KI L+ +A + AG+ +DA VL N R+ Q + L ++P+ E + + ++Q YTQ GG RPFG+S L +G+D + G LYQ+DP+G + WKA G NS + L+++ KE G+ T+K A+ ++V+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGF-QLYQSDPNGNYGGWKATCIGNNSAAAVSMLKQDYKE--GEMTLKSALALAIKVL 197
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA5_MOUSE (Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.603e-33 Identity = 82/217 (37.79%), Postives = 127/217 (58.53%), Query Frame = 3 Query: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-----VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFL-EKNCKETSGQETIKLAIRALLEVVES--GGKNIKVAVM 698 + YDR + FSP+G LFQVEYA+EA++ G+ A+G++ ++ + L VEK+ T L + S+ KIV +D HI A +GL ADA+ LI++AR+E Q+H T + +TVE +T+ ++ L ++ + RPFG++ L G D P L+ DPSGTF A A G S + L E K + +E IK ++ L +V+E NI++A + Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKG--PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATV 220
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA5_HUMAN (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 4.603e-33 Identity = 82/217 (37.79%), Postives = 127/217 (58.53%), Query Frame = 3 Query: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-----VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFL-EKNCKETSGQETIKLAIRALLEVVES--GGKNIKVAVM 698 + YDR + FSP+G LFQVEYA+EA++ G+ A+G++ ++ + L VEK+ T L + S+ KIV +D HI A +GL ADA+ LI++AR+E Q+H T + +TVE +T+ ++ L ++ + RPFG++ L G D P L+ DPSGTF A A G S + L E K + +E IK ++ L +V+E NI++A + Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKG--PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATV 220 The following BLAST results are available for this feature:
BLAST of CB610981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610981 ID=CB610981; Name=CB610981; organism=Citrus sinensis; type=EST; length=702bpback to top |