CB610981
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA1_MACFA (Proteasome subunit alpha type-1 OS=Macaca fascicularis GN=PSMA1 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28 Identity = 76/215 (35.35%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK---ETSGQETIKLAIRALLEVV----ESGGKNIKVAVM 698 +YD +TV+SP G + Q+EYA+EAV++G+A VG++ L K++ +L R +KI+ +DNHI ++ AGL ADAR+L N R EC R + P+ V + I Q TQ G RP+G+ LI G+D P ++QT PS + +A + G S S R +LE++ E + E +K +RAL E + + KN+ + ++ Sbjct: 5 QYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHR--KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMG--PHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIV 215
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA1B_ARATH (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana GN=PAF2 PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28 Identity = 77/207 (37.20%), Postives = 118/207 (57.00%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEK---NCKETSGQETIKLAIRALLEVVESGGKNIK 686 +YD +T +SP G LFQVEYA+EAV++G+AA+G+R + L K+ +L + RKI +D+HI +A AGL AD RVL R E +H T E P+ V + ++A Q TQ RP+G+ L+ G D LY PSG + ++A A G S + + +LE+ + +E+S ++ IK AI A+ E ++ G+ +K Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ--RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLD--ESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQESSKEDLIKDAIMAIRETLQ--GETLK 205
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4L_DROME (Proteasome subunit alpha type-4-like OS=Drosophila melanogaster GN=Prosalpha3T PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.613e-28 Identity = 68/177 (38.42%), Postives = 100/177 (56.50%), Query Frame = 3 Query: 69 MARY-DRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEK 596 MAR+ D T+FSP+G L+QVEYA+EA + VG+ + + L E+ + S V +I L+ +IA G AD VL+N+ R+ Q ++ + + E + + ++Q YTQ GG RPFG+S L +G+D G LYQ+DPSG +S WKA GR S + E L+K Sbjct: 1 MARFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIPVPRISWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRFGF-QLYQSDPSGNYSGWKATCIGRKSGAAMEMLQK 176
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA6_MOUSE (Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.413e-28 Identity = 72/212 (33.96%), Postives = 114/212 (53.77%), Query Frame = 3 Query: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK---ETSGQETIKLAIRALLEVVESGGKNIKVAV 695 A +DR IT+FSP+G L+QVEYA +A+ +G +V VRG D + +KK KL DS +V + + I G+ AD+R + RAR E + + + V+ + + IA + Q YTQ+ +RP G +++G D G P +Y+ DP+G + +KA A G FLEK K + + ++T++ AI L V+ K ++ V Sbjct: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQG-PQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEV 217
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA1_PONAB (Proteasome subunit alpha type-1 OS=Pongo abelii GN=PSMA1 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28 Identity = 75/215 (34.88%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK---ETSGQETIKLAIRALLEVV----ESGGKNIKVAVM 698 +YD +TV+SP G + Q+EYA+EAV++G+A VG++ L K++ +L + +KI+ +DNHI ++ AGL ADAR+L N R EC R + P+ V + I Q TQ G RP+G+ LI G+D P ++QT PS + +A + G S S R +LE++ E + E +K +RAL E + + KN+ + ++ Sbjct: 5 QYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ--KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMG--PHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIV 215
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA1_MOUSE (Proteasome subunit alpha type-1 OS=Mus musculus GN=Psma1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28 Identity = 75/215 (34.88%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK---ETSGQETIKLAIRALLEVV----ESGGKNIKVAVM 698 +YD +TV+SP G + Q+EYA+EAV++G+A VG++ L K++ +L + +KI+ +DNHI ++ AGL ADAR+L N R EC R + P+ V + I Q TQ G RP+G+ LI G+D P ++QT PS + +A + G S S R +LE++ E + E +K +RAL E + + KN+ + ++ Sbjct: 5 QYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ--KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMG--PHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLDELVKHGLRALRETLPAEQDLTTKNVSIGIV 215
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA1_HUMAN (Proteasome subunit alpha type-1 OS=Homo sapiens GN=PSMA1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28 Identity = 75/215 (34.88%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK---ETSGQETIKLAIRALLEVV----ESGGKNIKVAVM 698 +YD +TV+SP G + Q+EYA+EAV++G+A VG++ L K++ +L + +KI+ +DNHI ++ AGL ADAR+L N R EC R + P+ V + I Q TQ G RP+G+ LI G+D P ++QT PS + +A + G S S R +LE++ E + E +K +RAL E + + KN+ + ++ Sbjct: 5 QYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ--KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMG--PHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIV 215
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA1_BOVIN (Proteasome subunit alpha type-1 OS=Bos taurus GN=PSMA1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28 Identity = 75/215 (34.88%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK---ETSGQETIKLAIRALLEVV----ESGGKNIKVAVM 698 +YD +TV+SP G + Q+EYA+EAV++G+A VG++ L K++ +L + +KI+ +DNHI ++ AGL ADAR+L N R EC R + P+ V + I Q TQ G RP+G+ LI G+D P ++QT PS + +A + G S S R +LE++ E + E +K +RAL E + + KN+ + ++ Sbjct: 5 QYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ--KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMG--PHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIV 215
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA1_RAT (Proteasome subunit alpha type-1 OS=Rattus norvegicus GN=Psma1 PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.604e-28 Identity = 75/215 (34.88%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE---TSGQETIKLAIRALLEVV----ESGGKNIKVAVM 698 +YD +TV+SP G + Q+EYA+EAV++G+A VG++ L K++ +L + +KI+ +DNHI ++ AGL ADAR+L N R EC R + P+ V + I Q TQ G RP+G+ LI G+D P ++QT PS + +A + G S S R +LE++ E + E +K +RAL E + + KN+ + ++ Sbjct: 5 QYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ--KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMG--PHVFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMQCNLDELVKHGLRALRETLPAEQDLTTKNVSIGIV 215
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA1A_ARATH (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana GN=PAF1 PE=1 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 9.931e-28 Identity = 76/207 (36.71%), Postives = 117/207 (56.52%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK---ETSGQETIKLAIRALLEVVESGGKNIK 686 +YD +T +SP G LFQVEYA+EAV++G+AA+G+R + L K+ +L + RKI +D+HI +A AGL AD RVL R E +H T E P+ V + ++A Q TQ RP+G+ L+ G D LY PSG + ++A A G S + + +LE+ + ++S ++ IK AI A+ E ++ G+ +K Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ--RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLD--ESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDSSREDLIKDAILAVRETLQ--GETLK 205 The following BLAST results are available for this feature:
BLAST of CB610981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB610981 ID=CB610981; Name=CB610981; organism=Citrus sinensis; type=EST; length=702bpback to top |