CB611025

Overview
NameCB611025
Unique NameCB611025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.535e-26
Identity = 68/165 (41.21%), Postives = 90/165 (54.55%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV--GEA---LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            K NL  I+  N+   +    +N  AD+++ E      G +    R     K++    P V  G++   +PDS DWR + +V  VK Q  CGSCWAFS +A +E +  I     + LSEQ+LVDCD   N GCNGGLM +AFE II  GGI  E  YPY  +DG C
Sbjct:   68 KQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLSLMRGE---KKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD-KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVC 228          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.311e-26
Identity = 63/169 (37.28%), Postives = 94/169 (55.62%), Query Frame = 3
Query:   15 KV*DLKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEA----LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            K+ + K+NL+ I+E N  ++     +N ++DL          G R G K+       ++  +  + +     LP+++DWR K  V  VK+Q  CGSCWAFSTIA +E +  I     ++LSEQ LV+CD + N GC GGLM +A E I+  GG+ + E+ PY   DG C
Sbjct:   52 KLENFKNNLKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD-NINNGCAGGLMHWALESILQEGGVVSAENEPYYGFDGVC 219          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.647e-26
Identity = 65/165 (39.39%), Postives = 86/165 (52.12%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            ++ L+ I  HN EN   K G    +N F D T+EE+R M +       R      + +      G  LP  VDWRKKG V  V+ QG C +CWAF+   A+E      TG L  LS Q LVDC     N GC GG    AF++++ NGG+++E  YPY+  DG C
Sbjct:   53 EEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMIEISVWTHREGKSIMKRE-----AGSILPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPC 212          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 9.633e-26
Identity = 66/164 (40.24%), Postives = 89/164 (54.27%), Query Frame = 3
Query:   36 NLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLG-ARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            N + I+ HN E       + + +N F DLTN E+  M  G  R   K+T +       Y+P+        VDWR+ G V  VK+QG C S WAFS   ++EG     T  LI LSEQ L+DC  ++   GC+GG M YAF+++ DNGG+ TEE YPY+     C
Sbjct:   55 NFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLYVPK-------RVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGREC 211          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.633e-26
Identity = 62/158 (39.24%), Postives = 90/158 (56.96%), Query Frame = 3
Query:   36 NLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            NL  I   N  + T +  +N+F+DL+ +E  S Y G     +  +         L R  +  P   DWR+   V  VK+QG CG+CWAF+T+A++E    I    LI+LSEQ+L+DCD   + GCNGGL+  A+E ++  GG+  E DYPY+  DG+C
Sbjct:   55 NLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVV---VLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCD-YVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNC 208          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.258e-25
Identity = 68/160 (42.50%), Postives = 93/160 (58.13%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII--DNGGIDTEEDYPYKAIDG 503
            ++NL     H + N     G+  F+DLT EE+RS Y     GA   +   +R+   +       P +VDWR +GAV  VKDQG CGSCWAFS I  VE    +    L +LSEQ LV CD + + GC+GGLM+ AFE+I+  +NG + TE+ YPY + +G
Sbjct:   63 RENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHN---GAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT-DSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEG 218          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.146e-25
Identity = 62/160 (38.75%), Postives = 90/160 (56.25%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            + NL  I   N  + T +  +N+FADL+ +E  S Y G     +  +         L R  +  P   DWR+   V  VK+QG CG+CWAF+T+ ++E    I     I+LSEQ+L+DCD   + GC+GGL+  AFE +++ GGI  E DYPY+A +G C
Sbjct:   53 RHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVV---VLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCD-FVDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGDC 208          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.146e-25
Identity = 67/148 (45.27%), Postives = 88/148 (59.46%), Query Frame = 3
Query:   75 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKR--SDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            +Y   LN  ADLT+EE+  +  G R    +T L+ KR  S+ Y     E LPD VDWR KGAV  V++QG CGSC+AF+T AA+E  +K +TG L+ LS Q +VDC  +  N GC+GG M  AF++     GI  E  YPY   +  C
Sbjct:  134 SYTTALNDLADLTDEEFM-VRNGLRL-PNQTDLRGKRQTSEFYRYDKSERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLGNNGCSGGYMPTAFQY-ASRYGIAMESRYPYVGTEQRC 278          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.660e-25
Identity = 63/167 (37.72%), Postives = 97/167 (58.08%), Query Frame = 3
Query:   24 DLKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGA---RFGAKRTSLKSKRSDRYLPRVGEAL--PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            + K NL  ++  N+ +     G+N+F+D+    + + + G       +  ++    R   Y+   G +   P+S DWRK   V +VK+QG CGSCWAF+ I  +E    I+  SLI LSEQ+L+DCD   ++GC+GGLM  AF+ II  GG++ E DYPY+ I+ +C
Sbjct:   56 NFKRNLADMNAMNNVSNQAVYGINKFSDIDKITFVNEHAGLVSNLINSTDSNFDPYRLCEYVTVAGPSARTPESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCD-RVDQGCDGGLMHLAFQEIIRIGGVEHEIDYPYQGIEYAC 221          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.065e-24
Identity = 61/158 (38.61%), Postives = 87/158 (55.06%), Query Frame = 3
Query:   36 NLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            NL  I   N  + T +  +N+F+DL+ EE  S Y G     +  +         L R  +  P   DWR+   V  VK+QG CG+CWAF+T+ ++E    I    LI+LSEQ+ +DCD   N GC+GGL+  AFE  ++ GG+  E DYPY+  +G C
Sbjct:   55 NLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLSLPHQTQNFCEVV---ILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCD-RVNAGCDGGLLHTAFESAMEMGGVQMESDYPYETANGQC 208          
The following BLAST results are available for this feature:
BLAST of CB611025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CATV_GVXN2.535e-2641.21Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATV_GVCP3.311e-2637.28Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATR_MOUSE5.647e-2639.39Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
TEST2_RAT9.633e-2640.24Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATV_NPVHC9.633e-2639.24Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CYSP_TRYCR1.258e-2542.50Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATV_NPVCF2.146e-2538.75Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATL_BRUPA2.146e-2545.27Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CATV_NPVST3.660e-2537.72Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATV_NPVOP1.065e-2438.61Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_C03 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611025 ID=CB611025; Name=CB611025; organism=Citrus sinensis; type=EST; length=549bp
GGGGAAAAAGAGAAAAGGTTTGAGATCTTAAGGACAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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