CB611025

Overview
NameCB611025
Unique NameCB611025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.538e-23
Identity = 54/100 (54.00%), Postives = 65/100 (65.00%), Query Frame = 3
Query:  216 ALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDT 515
            A+P S+DWR  GAV  VK+Q  CG+CWAF+ IA VE I KI  G L  LSEQ+++DC   Y  GC GG    AFEFII N G+ +   YPYKA  G+C T
Sbjct:    1 AVPQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDCAKGY--GCKGGWEFRAFEFIISNKGVASGAIYPYKAAKGTCKT 98          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.009e-23
Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = 3
Query:   36 NLRFIDEHNSENRTYKVGLNR-FADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV---GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDT 515
            N RF+ E N +  ++K+ ++  FA +TNEEYR++            LKSKR+     +V       P+SVDWR +G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ LV C   + N GCNGGL    +++II N G+  E DYPY   D +C T
Sbjct:   35 NARFVAEFNKKG-SFKLSVDGPFAAMTNEEYRTL------------LKSKRTVEENGKVTYLNIQAPESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYIIQN-GVAKESDYPYTGTDSTCKT 188          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.475e-23
Identity = 58/154 (37.66%), Postives = 87/154 (56.49%), Query Frame = 3
Query:   48 IDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            I ++ ++   YK+  N+F+DL+ +E  + Y G        +          P  G   P   DWR+   +  VK+QG CG+CWAF+T+A++E    I    LI+LSEQ+++DCD S + GC GGL+  AFE II  GG+  E DYPY++ +  C
Sbjct:   60 ITKNRNDTAVYKI--NKFSDLSKDETIAKYTGLSLPLHTQNFCEVVVLDRPPGKG---PLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCD-SVDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSNNYC 207          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.844e-23
Identity = 64/168 (38.10%), Postives = 96/168 (57.14%), Query Frame = 3
Query:   36 NLRFIDEHNSENRTYKVGLNR-FADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV---GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDT 515
            N +F+D  N    ++K+ ++  FA +TNEEYR++            LKSKR+     +V       P+SVDWRK+G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ +V C   + N GCNGGL    +++II++ G+  E DYPY   D +C T
Sbjct:   42 NAKFVDSFNKIG-SFKLSVDGPFAAMTNEEYRTL------------LKSKRTTEENGQVKYLNIQAPESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEH-GVAKESDYPYTGSDSTCKT 195          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.844e-23
Identity = 63/165 (38.18%), Postives = 87/165 (52.73%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAK-----RTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            + N+  I+  NS N +    +NRFAD+T  E  + + G   G        T +      R  P        + DWR    V  VKDQG CG+CWAF+ + A+E    I    LI L+EQ+LVDCD   + GC+GGL+  A+E I+  GG++ E DYPYKA+   C
Sbjct:   65 RHNIESINAKNSRNDSAVYKINRFADMTKNEVVNRHTGLASGDIGANFCETIVVDGPGQRQRPA-------NFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCD-FVDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAVRLPC 221          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.900e-22
Identity = 66/186 (35.48%), Postives = 106/186 (56.99%), Query Frame = 3
Query:   12 EKV*DLKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMY---------LGARFGAKRTSLKSKRSDRYLPRVGEA-----LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGI-NKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDG-SCDTYR 521
            EK  + K N   I +HN  N+ YK+ +N+F+D + +++ S +         L  ++    +S+ + +    +     A     +P+ +D+R+KG V E KDQG CGSCWAF+++  VE +  K    ++++LSEQE+VDC +  N GC+GG   Y+F + I+N GI   +DY YKA+D   C  YR
Sbjct:  256 EKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKLVPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC-SKLNFGCDGGHPFYSFIYAIEN-GICMGDDYKYKAMDNLFCLNYR 439          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.439e-22
Identity = 62/167 (37.13%), Postives = 94/167 (56.29%), Query Frame = 3
Query:   36 NLRFIDEHNSENRTYKVGLNR-FADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV---GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDT 515
            N +F+D  N    ++K+ ++  FA +TNEEYR++            LKSKR+     +V       P+SVDWRK+G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ +     + N GCNGGL    +++II++ G+  E DYPY   D +C T
Sbjct:   38 NAKFVDSFNKIG-SFKLSVDGPFAAMTNEEYRTL------------LKSKRTTEENGQVKYLNIQAPESVDWRKEGKVTPLRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMQCTRDNGNNGCNGGLGSNVYDYIIEH-GVAKESDYPYTGSDSTCKT 190          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.102e-21
Identity = 60/160 (37.50%), Postives = 83/160 (51.88%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            + N+  I++ NS N +    +NRFAD+   E    + G   G     L    +           P S DWR    +  VKDQG CG+CW F+++ A+E    I    LI LSEQ+LVDCD   + GC+GGL+  A+E I+  GG++ E DY YKA    C
Sbjct:   65 RHNIESINQKNSRNDSAVYKINRFADMPKNEIVIRHTGLASG--ELGLNFCETIVVDGPAQRQRPVSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDCD-FVDMGCDGGLIHTAYEQIMKMGGVEQEFDYSYKAERQPC 221          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.880e-21
Identity = 56/161 (34.78%), Postives = 87/161 (54.04%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            +  L  I+  N  N +    +N+FADL+  E  S Y G     + T+          P  G   P + DWR++  V  +K+Q +CG+CWAF+T+A++E    I     I LSEQ+++DCD   + GC+GGL+  AFE +I  G +  E +YPY  ++  C+
Sbjct:   56 QQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGLNMPVQTTNFCKTIVIDQPPGKG---PLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCD-YVDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCE 212          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.032e-19
Identity = 56/158 (35.44%), Postives = 90/158 (56.96%), Query Frame = 3
Query:   42 RFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFG-AKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNG-GIDTEEDYPYKAIDGSC 509
            R+++    EN T   G+N+F+ L  EE++++YLG+++  A R   + +R    +P V  +LP   DWR K  V  V++Q  CG CWAFS ++A+E    I   SL  LS Q+++DC  + N GC GG    A  ++ +    +  +  YP+KA++G C
Sbjct:   44 RYLNSFPHENSTAFYGVNQFSYLFPEEFKALYLGSKYAWAPRYPAEGQRP---IPNV--SLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN-NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQC 195          
The following BLAST results are available for this feature:
BLAST of CB611025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
BROM2_ANACO1.538e-2354.00Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CPP3_ENTHI2.009e-2339.29Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CATV_NPVEP4.475e-2337.66Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CPP2_ENTHI5.844e-2338.10Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CATV_NPVMC5.844e-2338.18Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CYSP_PLAVS2.900e-2235.48Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
ACP2_ENTHI8.439e-2237.13Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
CATV_NPVSE1.102e-2137.50Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATV_NPVBS1.880e-2134.78Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CATO_MOUSE1.032e-1935.44Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_C03 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611025 ID=CB611025; Name=CB611025; organism=Citrus sinensis; type=EST; length=549bp
GGGGAAAAAGAGAAAAGGTTTGAGATCTTAAGGACAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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