CB611092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.084e-34 Identity = 67/116 (57.76%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 130 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC---VNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 G GW+ AHATFY YGNLYS+GYGTNTAALSTALFNNG+SCGACFE++C C PGS+ VTATNFC GGWCNPP+ HFD+SQPVF++I+ Sbjct: 61 GGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIA 176
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 9.177e-34 Identity = 69/119 (57.98%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 127 YGQG-WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDP--RWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 YG G W AHATFY YGNLYS+GYG N AALSTALFN+G SCGACFEIKCVN P WC PG SI +TATNFC GGWCNPP+ HFDL+ P+F I+ Sbjct: 31 YGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIA 149
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 1.565e-33 Identity = 62/111 (55.86%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 136 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 GW HATFY YGNL+S+GYG TAALSTALFN+G CGACFE++C +DP WC PGSI V+ATNFC GGWCNPP +HFDL++P F QI+ Sbjct: 31 GWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIA 141
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 4.555e-33 Identity = 62/113 (54.87%), Postives = 74/113 (65.49%), Query Frame = 1 Query: 127 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQI 465 YG W AHATFY YGNLYS GYGTNTAALST LFN+G +CG+C+E++C ND +WC PGS+ VTATN C GGWCNPP+ HFD+++P F QI Sbjct: 26 YGS-WQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQI 137
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.856e-32 Identity = 63/114 (55.26%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 127 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 YG GW AHATFY YGNLYS+GYGTNTAALSTALFN+G +CG+C+E++C N C PGSI VTATNFC GGWCNPP+ HFD+++P F I+ Sbjct: 21 YG-GWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIA 133
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.856e-32 Identity = 63/114 (55.26%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 127 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 YG GW AHATFY YGNLYS+GYGTNTAALSTALFN+G +CG+C+E++C N C PGSI VTATNFC GGWCNPP+ HFD+++P F I+ Sbjct: 21 YG-GWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIA 133
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.264e-31 Identity = 64/111 (57.66%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 139 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 W +AHATFY YGNLYS+GYG TAALSTALF+ G+SCGACFE+ CVNDP+WC G SI VTATNFC GG C+PP HFDLSQP++E+I+ Sbjct: 38 WINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFC--------PPGGACDPPNHHFDLSQPIYEKIA 140
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 7.272e-31 Identity = 60/110 (54.55%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 139 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 W DA ATFY YG+L+ +GYG TAALSTALFN G +CGAC++I CVNDP+WC PGS+ +TATNFC G WCNPPQ+HFDLS P+F +I+ Sbjct: 48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFC--PPDYSKTEGVWCNPPQKHFDLSLPMFLKIA 155
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 4.713e-30 Identity = 59/110 (53.64%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 139 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 W DA ATFY YG+L+ +GYG TAALSTALFN G +CGAC++I CV+DP+WC PG+I +TATNFC G WCNPPQ+HFDLS P+F +I+ Sbjct: 55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFC--PPDYSKTEGVWCNPPQKHFDLSLPMFLKIA 162
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 4.713e-30 Identity = 58/113 (51.33%), Postives = 74/113 (65.49%), Query Frame = 1 Query: 136 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQI 465 GW AHATFY YGNLY++GYGT TAALSTALFN+G++CG C+++ C D WC+PG S+ +TATNFC GGWCNPP+ HFD++QP +E+I Sbjct: 33 GWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKI 145 The following BLAST results are available for this feature:
BLAST of CB611092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB611092 ID=CB611092; Name=CB611092; organism=Citrus sinensis; type=EST; length=478bpback to top |