CB611092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.791e-29 Identity = 62/112 (55.36%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 139 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC-VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 WT A ATFY YG+LY GYGT TAALSTALFN G SCGACF I C +WC+PG SI VTATNFC GGWCNPP++HFD+SQP +E I+ Sbjct: 25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIA 136
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 1.791e-29 Identity = 58/112 (51.79%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 139 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQI 465 W AHATFY YGNLYS+GYGT AALSTALFN+G SCG C++I C P+WC+PG ++ +TATNFC GGWCNPP+ HFD++QP +E+I Sbjct: 39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKI 150
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.055e-29 Identity = 59/113 (52.21%), Postives = 74/113 (65.49%), Query Frame = 1 Query: 139 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND-PRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 W HATFY YGNLYS+GYGT+TAALSTALFN G+SCG+C+E++C D R C PG ++ VTATNFC GGWCNPP++HFDL++P F +I+ Sbjct: 28 WQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIA 140
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 3.055e-29 Identity = 59/111 (53.15%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 136 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 GW ATFY YG+L+ +GYG TAALSTALFNNG CGAC+EI C + P+WC PGSI +TATNFC WCNPPQ+HFDLSQP+F +I+ Sbjct: 89 GWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFC--PPDFTKPNDNWCNPPQKHFDLSQPMFLKIA 197
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 3.055e-29 Identity = 58/112 (51.79%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 139 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQI 465 W AHATFY YG+LYS+GYGT AALSTALFN+G SCG C++I C P+WCRPG ++ +TATNFC GGWCNPP+ HFD++QP +E+I Sbjct: 52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKI 163
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.990e-29 Identity = 60/114 (52.63%), Postives = 71/114 (62.28%), Query Frame = 1 Query: 136 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 GW AHATFY YGNLY++GY TNTAALSTALFN+G SCG C++I C P+WC G SI +TATNFC GGWCNPP+ HFD++QP F I+ Sbjct: 27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIA 140
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 6.806e-29 Identity = 59/113 (52.21%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 136 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQI 465 GW+ ATFY YGNLY++GYGT TAALSTALF++G SCG C+ + C DPRWCR G S+ VTATNFC GGWCNPP+ HFD++QP +E+I Sbjct: 33 GWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERI 145
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 6.806e-29 Identity = 58/110 (52.73%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 139 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 W DA ATFY YGNL+ +GYG TAALSTALFN+G +CGAC+EI C DP+WC PGS+ +TATNFC WCNPPQ+HFDLS +F +I+ Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIA 165
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 6.806e-29 Identity = 58/110 (52.73%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 139 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIS 468 W DA ATFY YGNL+ +GYG TAALSTALFN+G +CGAC+EI C DP+WC PGS+ +TATNFC WCNPPQ+HFDLS +F +I+ Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIA 159
BLAST of CB611092 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 6.806e-29 Identity = 57/112 (50.89%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 139 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQI 465 W AHATFY YG+LYS+GYGT AALSTALFN+G SCG C++I C P+WC+PG ++ +TATNFC GGWCNPP+ HFD++QP +E+I Sbjct: 34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKI 145 The following BLAST results are available for this feature:
BLAST of CB611092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB611092 ID=CB611092; Name=CB611092; organism=Citrus sinensis; type=EST; length=478bpback to top |