CB611111

Overview
NameCB611111
Unique NameCB611111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.073e-11
Identity = 41/132 (31.06%), Postives = 62/132 (46.97%), Query Frame = 3
Query:  204 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            G++  C+    A+V     L    T    ++ I     +  N  GE ++ C  I ++P++ FTI    + +    YIL+   G    C SGF   ++P   G LWILGDVF+  Y  VFD    ++G A  A
Sbjct:  262 GEAIACAEGCQAIVDTGTSLLSGPTSP--IANIQSYIGASENSNGEMVVSCSAISSLPDIVFTINGIQYPVPASAYILQDEGG----CTSGFQGMNIPTAYGELWILGDVFIRQYFAVFDRANNQVGLAPVA 387          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPA4_RABIT (Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.073e-11
Identity = 43/131 (32.82%), Postives = 63/131 (48.09%), Query Frame = 3
Query:  204 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 596
            G++  C+    A+V     L    T    +S I     +  N +GE++I C  I ++P++ FTI    + L    YILK  +     C SG    ++    G LWILGDVF+  Y TVFD    ++G A A
Sbjct:  262 GETIACADSCQAIVDTGTSLLTGPTS--AISNIQSYIGASKNLLGENVISCSAIDSLPDIVFTINGIQYPLPASAYILKEDDD----CTSGLEGMNVDTYTGELWILGDVFIRQYFTVFDRANNQLGLAAA 386          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.073e-11
Identity = 43/131 (32.82%), Postives = 63/131 (48.09%), Query Frame = 3
Query:  204 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 596
            G++  C+    A+V     L    T    +S I     +  N +GE++I C  I ++P++ FTI    + L    YILK  +     C SG    ++    G LWILGDVF+  Y TVFD    ++G A A
Sbjct:  262 GETIACADSCQAIVDTGTSLLTGPTS--AISNIQSYIGASKNLLGENVISCSAIDSLPDIVFTINGIQYPLPASAYILKEDDD----CTSGLEGMNVDTYTGELWILGDVFIRQYFTVFDRANNQLGLAAA 386          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPC_SUNMU (Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.013e-11
Identity = 37/107 (34.58%), Postives = 58/107 (54.21%), Query Frame = 3
Query:  282 EKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRG-PLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            ++ +S + +   +  +  G+  ++C+ I ++P ++F I    F L P  Y+L T       C  G     LP   G PLWILGDVF+  Y++V+D G  R+GFA AA
Sbjct:  287 QQFMSALQQATGAQQDQYGQLAVNCNSIQSLPTLTFIINGVQFPLPPSAYVLNTNG----YCFLGVEPTYLPSQNGQPLWILGDVFLRSYYSVYDMGNNRVGFATAA 389          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.940e-11
Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 3
Query:  297 YINELCDSL---PNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRG-PLWILGDVFMGVYHTVFDSGKLRIGFA 590
            Y+NEL  ++       G+  + CD + ++P ++F +    F LSP  YI++  EG    C+ G  +  L    G PLWILGDVF+  Y+ VFD G  R+G A
Sbjct:  292 YLNELLQTIGAQEGEYGQYFVSCDSVSSLPTLTFVLNGVQFPLSPSSYIIQE-EGS---CMVGLESLSLNAESGQPLWILGDVFLRSYYAVFDMGNNRVGLA 389          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.940e-11
Identity = 35/86 (40.70%), Postives = 46/86 (53.49%), Query Frame = 3
Query:  336 GESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRG-PLWILGDVFMGVYHTVFDSGKLRIGFA 590
            G  +++C+ I +MP ++F I      L P  Y+L         C  G     LP P G PLWILGDVF+  Y+TVFD    R+GFA
Sbjct:  306 GNFVVNCNSIQSMPTITFVISGSPLPLPPSTYVLNNNG----YCTLGIEVTYLPSPNGQPLWILGDVFLREYYTVFDMAANRVGFA 387          
The following BLAST results are available for this feature:
BLAST of CB611111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
PEPA_CALJA3.073e-1131.06Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
PEPA4_RABIT3.073e-1132.82Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA2_RABIT3.073e-1132.82Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPC_SUNMU4.013e-1134.58Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2[more]
PEPC_MOUSE8.940e-1137.25Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]
PEPB_CANFA8.940e-1140.70Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIaF_H08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIaF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611111 ID=CB611111; Name=CB611111; organism=Citrus sinensis; type=EST; length=855bp
GGGATGCCATTGGTGGCGATGGAGTTGTTAGTGCAGAGTGTAAGCTAGTT
GTTTCCCACTACGGGGATTTAATATGGGATCTTTTAGTATCAGGGCTACT
ACCTGAGAAAGTATGTCAGCAGATTGGTTTATGTGCTTTCAATGGCGCTG
AATATGTGAGTACTGGGATCAAGACCGTGGTTGAGAAGGAAAACGTATCA
GCCGGGGATAGTGCAGTGTGCAGTGCTTGTGAAATGGCCGTGGTTTGGGT
CCAGAATCAGCTAAAACAAAAGCAAACAAAGGAGAAAGTACTCAGTTATA
TAAATGAGCTCTGCGACAGCCTGCCAAATCCGATGGGCGAATCAATTATT
GACTGTGATCGCATTCCAACCATGCCAAATGTTTCATTCACCATCGGAGA
CAAAATTTTCAACCTCTCTCCAGAGCAGTATATTCTGAAAACCGGAGAAG
GGATTGCAGAAGTCTGCATCAGTGGCTTCATGGCTTTCGACCTGCCTCCT
CCAAGGGGTCCTCTGTGGATTCTGGGAGATGTATTCATGGGGGTTTATCA
CACTGTTTTCGACTCTGGTAAGCTCCGGATCGGCTTTGCTGAGGCTGCGT
AATGATCTACTTACTGTCAAGTTTTTATGTAGTAGCAGCGATCATCACCT
GCTCATATGAGGAGGAGGGTTCTAGAATGTAGATTATGGTTTTCATGTAC
TGTAAAACGATCAGTATGCTTTTATGCATAACTATCTTCATCATCACCAC
AGATGATATGCTGATATATACTTATGTAAAATCCTATCATCCTATGTTTA
AAGTGATTTAATTTTATGATATTCTGACGGATAAAAGATAAAAAAAAAAA
AAAAA
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