CB611119

Overview
NameCB611119
Unique NameCB611119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611119 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.492e-12
Identity = 63/212 (29.72%), Postives = 94/212 (44.34%), Query Frame = 1
Query:  187 PFAQRAWITRNYKGL------QDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALD-KFDDGPFFLG-QFSQVDIAYIPFVERFQIFLSEEFKYDITAGR---PKLAAWIEELNKLDAYKSTKADPKQLVEFYRSRFVA 783
            PF+ R       KG+      +D+     L LQ  P +         KVP L HNGK I ES+ +++Y+D  FEGPS+LP DP  R +A      +D     V  +F  KG+  ++       + K LD +  D  FF G +F   DIA    +  F + + EE   D+       P  + W +E         +     +L+ F+R+RF A
Sbjct:   13 PFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVY--------KKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIA--ANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRARFQA 214          
BLAST of CB611119 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.180e-11
Identity = 64/222 (28.83%), Postives = 96/222 (43.24%), Query Frame = 1
Query:  187 PFAQRAWITRNYKGL------QDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIA--------DELFSHIDTFTNDVYTSFKGDPAKQAGPAFDYLEKALD-KFDDGPFFLG-QFSQVDIA-------YIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRSRFVA 783
            PF  R       KG+      +D+     L LQ  P           KVP L HNGK I ES+ +++Y+D  FEGPS+LP DP  R +A        D++ + ++TF        KG+  ++       + K LD +  D  FF+G +F   DIA          F E + + L    K+      P  + W +E       K +     +L+ F+R+RF A
Sbjct:   13 PFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVH--------KKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFR------KGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKF------PNFSRWRDEYINCSQVKESLPSRDELLAFFRARFQA 214          
BLAST of CB611119 vs. ExPASy Swiss-Prot
Match: GSTO2_CAEEL (Probable glutathione transferase omega-2 OS=Caenorhabditis elegans GN=gsto-2 PE=2 SV=4)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 64/234 (27.35%), Postives = 112/234 (47.86%), Query Frame = 1
Query:  130 AELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHN--GKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFSHIDTFTNDVYTSFKGDPAKQAGPAFDYLE-------KALDKFDD---GPFFLGQFSQ--VDIAYIPFVER--FQIFLSEEFKYDITA----GRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 771
            A  PP   GT R+Y    CP+AQRA I  + K +  ++  + ++L  +P W+  K Y   +VPALEH+   K++ ES  + +Y+D  +  P ++P D    K+  +L   +D  +  + ++F G    QA    D L+       KA D  ++   G F+ G      VD    P ++R  +   + ++F   + +      PKL+ W + L+ +    +T    +  VEF++S
Sbjct:  301 APAPPA-SGTIRIYNMRYCPWAQRALIFASLKKIPTEV--INIHLDQKPDWFFTKHY-KGQVPALEHDEGKKIVIESAVIPEYLDDIYPEPRIIPTD-HYEKVQQKLL--LDRISGQLSSAFYG--VVQAAKISDLLKEKLVELAKAYDTAEELLTGDFYSGTSKPGFVDYLIYPNIQRAFWTSHIIKDFPLKVESFPGPNYPKLSKWYKRLDSIPEVIATSQPTETAVEFFKS 525          
BLAST of CB611119 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 62/207 (29.95%), Postives = 90/207 (43.48%), Query Frame = 1
Query:  187 PFAQRAWITRNYKGL------QDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALD-KFDDGPFFLG-QFSQVDIAYIPFVERFQIFLSEEFKYDITAGR-PKLAAWIEELNKLDAYKSTKADPKQLVEFYRSR 774
            PF++R       KG+      +D+     L LQ  P           KVP L HNGK I ES+ +++Y+D  FEGPS+LP DP  R +A      +D     V  +F  KG+  ++       + K LD +  D  FF+G +F   DIA         +F        +T+ + P    W  E       K +     +L+ FYRSR
Sbjct:   13 PFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIH--------KKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVPAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAFYRSR 211          
The following BLAST results are available for this feature:
BLAST of CB611119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
GSTX2_TOBAC7.492e-1229.72Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC2.180e-1128.83Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTO2_CAEEL2.847e-1127.35Probable glutathione transferase omega-2 OS=Caenor... [more]
GSTX1_TOBAC4.856e-1129.95Probable glutathione S-transferase OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIaF_F10 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIaF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611119 ID=CB611119; Name=CB611119; organism=Citrus sinensis; type=EST; length=810bp
GGGGATTTCGGTATCACATTACTTTCTTCTTCAAAGCAAAAGAAAAGCGA
TCAGGAAACCTCTAGAGTCTTACCTTCCTCAATGGCCACCACAGCGCAAG
AGAATCTTCCTCCACCGTTGGATTCGAAGGCCGAGCTACCACCTCTGTTC
GATGGAACTCCCAGGTTGTACATTTCTTACTCGTGCCCATTTGCTCAGCG
TGCGTGGATCACCAGGAACTACAAGGGATTACAAGACAAGATTAAGTTAG
TTCCACTGAACCTCCAAGATAGGCCCGCTTGGTACAAGGAGAAGGTTTAT
CCTGCTAACAAGGTTCCAGCACTGGAGCACAATGGCAAAGTTATTGGAGA
ATCTCTTGATTTGATTAAATATGTTGACAGCAATTTTGAAGGGCCTTCAC
TTTTACCTGATGATCCTGAGAAACGAAAGATTGCTGATGAACTGTTTTCC
CACATCGATACCTTCACCAACGATGTGTATACTTCATTCAAAGGAGACCC
AGCAAAACAAGCTGGTCCTGCTTTTGATTACTTAGAGAAGGCCCTTGATA
AATTTGATGATGGCCCGTTCTTCCTTGGACAGTTCAGTCAGGTGGACATA
GCCTATATTCCATTTGTTGAGAGATTCCAGATCTTCTTATCAGAAGAATT
TAAGTATGACATCACTGCAGGCAGGCCTAAACTGGCAGCATGGATTGAGG
AGTTGAACAAGCTCGATGCTTACAAGTCAACAAAAGCAGATCCAAAACAA
CTCGTTGAATTTTACAGGAGCCGCTTCGTGGCCAAGCAGTGAACCTGCAA
TCAATCGTCT
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