CB611143

Overview
NameCB611143
Unique NameCB611143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.457e-54
Identity = 110/147 (74.83%), Postives = 120/147 (81.63%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VSDR+VDSPCCLVTGEYGWTANMERIMKAQALRD+SM+ YMSSKKTMEINP+N IMEELRKRA+ADKNDKSVKD            SGFSLDDPNTF  RIHRMLKLGLSI EE+    DADMP LE+  ++   SKMEEVD
Sbjct:  356 VEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLSIDEEEEAVEDADMPALEETGEE---SKMEEVD 499          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.001e-44
Identity = 93/155 (60.00%), Postives = 111/155 (71.61%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEED---------AGDADADMPPLEDAADDAEGSKMEEVD 442
            VEKV VS+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PIME LR++A+ADKNDK+VKD            SGFSLDDP T  NRI+RM+KLGL I+ED         +  A  D+PPLE    D + S+MEEVD
Sbjct:  574 VEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIMETLRQKAEADKNDKAVKDLVILLFETALLSSGFSLDDPQTHSNRIYRMIKLGLGIDEDEDVPVEEPSSAAAPEDIPPLE---GDDDASRMEEVD 725          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 1.945e-43
Identity = 92/153 (60.13%), Postives = 112/153 (73.20%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VS+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD            SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  584 VEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.945e-43
Identity = 92/153 (60.13%), Postives = 112/153 (73.20%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VS+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD            SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  584 VEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 1.945e-43
Identity = 92/153 (60.13%), Postives = 112/153 (73.20%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VS+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD            SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  584 VEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 175.637 bits (444), Expect = 1.945e-43
Identity = 92/153 (60.13%), Postives = 112/153 (73.20%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VS+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD            SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  583 VEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLE---GDDDTSRMEEVD 732          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 1.945e-43
Identity = 92/153 (60.13%), Postives = 112/153 (73.20%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VS+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD            SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  584 VEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 174.096 bits (440), Expect = 5.660e-43
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 442
            VEKV +S+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD            SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  575 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 5.660e-43
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 442
            VEKV +S+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD            SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  575 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 5.660e-43
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 442
            VEKV +S+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD            SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  575 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
The following BLAST results are available for this feature:
BLAST of CB611143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
HSP82_TOBAC5.457e-5474.83Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]
HS90B_DANRE3.001e-4460.00Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
HS90A_PIG1.945e-4360.13Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_PANTR1.945e-4360.13Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90A_MACFA1.945e-4360.13Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN1.945e-4360.13Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_BOVIN1.945e-4360.13Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90B_RAT5.660e-4358.17Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_MOUSE5.660e-4358.17Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HS90B_BOVIN5.660e-4358.17Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611143 ID=CB611143; Name=CB611143; organism=Citrus sinensis; type=EST; length=658bp
GGGGGTCGAGAAGGTTCTGGTGTCTGACCGTGTTGTTGACTCACCCTGCT
GTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATCATG
AAGGCTCAGGCCTTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAA
GAAGACCATGGAGATCAATCCGGAGAACCCCATCATGGAGGAGCTGAGGA
AGAGGGCTGATGCGGACAAGAATGACAAGTCTGTGAAGGACCTTGCCCTT
CTGCTCTTTGAGACTGCTCTCCTCACTTCTGGTTTCAGCCTTGATGACCC
TAACACTTTCGGCAACAGAATCCACAGGATGTTGAAACTCGGGCTGAGCA
TCGAGGAGGATGCTGGTGATGCTGATGCTGACATGCCACCATTGGAGGAT
GCTGCTGACGATGCTGAGGGCAGCAAGATGGAGGAAGTTGATTAAGAAGC
TATAATAGTCTGATATACTAGTCTTTTTTCATGAAACTCTTTTAACTAGG
TAGTTTCTTTTTGTTATGCGTTCTGTGGTGGTAGTACTGTGGGATTAGTG
CTTTTATATTTTTATTTTCTCTCTTTGGTGGAGGTTTTGTTTTATTGTTT
TGCAAATGCTTAAAAAGTATGCTGTTTACAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
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