CB611143

Overview
NameCB611143
Unique NameCB611143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 5.660e-43
Identity = 91/153 (59.48%), Postives = 111/153 (72.55%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VS+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD            SGFSL+DP T  NRI+RM+KLGL I+ED    D        +MPPLE    D + S+MEEVD
Sbjct:  584 VEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 174.096 bits (440), Expect = 5.660e-43
Identity = 91/153 (59.48%), Postives = 111/153 (72.55%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VS+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD            SGFSL+DP T  NRI+RM+KLGL I+ED    D        +MPPLE    D + S+MEEVD
Sbjct:  584 VEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.392e-43
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 442
            VEKV +S+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD            SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  575 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 173.711 bits (439), Expect = 7.392e-43
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 442
            VEKV +S+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD            SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  575 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPNAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 7.392e-43
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 442
            VEKV +S+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD            SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  575 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 7.392e-43
Identity = 91/153 (59.48%), Postives = 112/153 (73.20%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VS+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD            SGFSL+DP T  NRI+RM+KLGL I+ED   A+        +MPPLE    D + S+MEEVD
Sbjct:  579 VEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDTAAEEASPAVTEEMPPLE---GDDDTSRMEEVD 728          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HSP90_PLAFP (Heat shock 90 kDa protein homolog (Fragment) OS=Plasmodium falciparum (isolate Palo Alto / Uganda) PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.647e-42
Identity = 88/146 (60.27%), Postives = 108/146 (73.97%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 442
            VEKV+V  R+ DSPC LVT E+GW+ANMERIMKAQALRDNSM  YM SKK MEIN  +PI+  L+++ADADK+DK+VK             SGF+L++P TF  RIHRM+KLGLSI+E+  + D D+PPLE+   DA  SKMEEVD
Sbjct:   50 VEKVVVGQRITDSPCVLVTSEFGWSANMERIMKAQALRDNSMTSYMLSKKIMEINARHPIISALKQKADADKSDKTVKYLIWLLFDTSLLTSGFALEEPTTFSKRIHRMIKLGLSIDEEENN-DIDLPPLEETV-DATDSKMEEVD 193          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.647e-42
Identity = 90/153 (58.82%), Postives = 111/153 (72.55%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VS+R+V SPCC+VT  YGWTANMERI+KAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD            SGFSL+DP T  NRI+RM+KLGL I+ED    D        +MPPLE    D + S+MEEVD
Sbjct:  584 VEKVVVSNRLVTSPCCIVTSTYGWTANMERIIKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.151e-42
Identity = 88/153 (57.52%), Postives = 111/153 (72.55%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 442
            VE+V +S+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD            SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  575 VEEVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.151e-42
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 442
            VEKV +S+R+V SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++ADA+KNDK+VKD            SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  576 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKADANKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVIAEESSIAPPDEIPPLE---GDEDTSRMEEVD 725          
The following BLAST results are available for this feature:
BLAST of CB611143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
HS90A_RAT5.660e-4359.48Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_MOUSE5.660e-4359.48Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HS90B_MACFA7.392e-4358.17Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN7.392e-4358.17Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE7.392e-4358.17Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90A_CHICK7.392e-4359.48Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]
HSP90_PLAFP1.647e-4260.27Heat shock 90 kDa protein homolog (Fragment) OS=Pl... [more]
HS90A_CRIGR1.647e-4258.82Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HS90B_PONAB2.151e-4257.52Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HS90B_CHICK2.151e-4258.17Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611143 ID=CB611143; Name=CB611143; organism=Citrus sinensis; type=EST; length=658bp
GGGGGTCGAGAAGGTTCTGGTGTCTGACCGTGTTGTTGACTCACCCTGCT
GTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATCATG
AAGGCTCAGGCCTTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAA
GAAGACCATGGAGATCAATCCGGAGAACCCCATCATGGAGGAGCTGAGGA
AGAGGGCTGATGCGGACAAGAATGACAAGTCTGTGAAGGACCTTGCCCTT
CTGCTCTTTGAGACTGCTCTCCTCACTTCTGGTTTCAGCCTTGATGACCC
TAACACTTTCGGCAACAGAATCCACAGGATGTTGAAACTCGGGCTGAGCA
TCGAGGAGGATGCTGGTGATGCTGATGCTGACATGCCACCATTGGAGGAT
GCTGCTGACGATGCTGAGGGCAGCAAGATGGAGGAAGTTGATTAAGAAGC
TATAATAGTCTGATATACTAGTCTTTTTTCATGAAACTCTTTTAACTAGG
TAGTTTCTTTTTGTTATGCGTTCTGTGGTGGTAGTACTGTGGGATTAGTG
CTTTTATATTTTTATTTTCTCTCTTTGGTGGAGGTTTTGTTTTATTGTTT
TGCAAATGCTTAAAAAGTATGCTGTTTACAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
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