CB611182

Overview
NameCB611182
Unique NameCB611182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length322
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.736e-29
Identity = 61/81 (75.31%), Postives = 67/81 (82.72%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSL 244
            AYLVA+ V V +KHNDDEQY+WES AGGSFTV +D   EPLGRGT+I LHLKEDQ EYLEERRLKDL+ KHSEFIS P  L
Sbjct:  128 AYLVADSVTVVSKHNDDEQYVWESAAGGSFTVQKDDKYEPLGRGTRIILHLKEDQGEYLEERRLKDLVKKHSEFISFPIEL 208          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 8.078e-29
Identity = 59/83 (71.08%), Postives = 71/83 (85.54%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVA+KV+VT+K+NDDEQY+WES AGGSFTV  D SGEPLGRGTKI LH+KEDQLEYLEE ++K ++NKHS+FI  P  L +
Sbjct:  131 AYLVADKVVVTSKNNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHIKEDQLEYLEESKIKQIVNKHSQFIGYPIKLLV 212          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 1.055e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI  P +L++
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFV 222          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 1.055e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI  P +L++
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFV 222          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 125.176 bits (313), Expect = 1.055e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI  P +L++
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFV 222          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 1.055e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI  P +L++
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFV 222          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 125.176 bits (313), Expect = 1.055e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI  P +L++
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFV 222          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.055e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI  P +L++
Sbjct:  130 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFV 211          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 1.055e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI  P +L++
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFV 222          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 1.800e-28
Identity = 58/83 (69.88%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GEP+GRGTK+ LHLKEDQ EY+EERR+K+++ KHS+FI  P +L++
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYMEERRIKEIVKKHSQFIGYPITLFV 222          
The following BLAST results are available for this feature:
BLAST of CB611182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
HSP90_EIMTE4.736e-2975.31Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HSP83_ANOGA8.078e-2971.08Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
HS90A_RAT1.055e-2871.08Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_PIG1.055e-2871.08Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_MOUSE1.055e-2871.08Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HS90A_MACFA1.055e-2871.08Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN1.055e-2871.08Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_HORSE1.055e-2871.08Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HS90A_BOVIN1.055e-2871.08Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90A_CRIGR1.800e-2869.88Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIIaF_H04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIIaF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611182 ID=CB611182; Name=CB611182; organism=Citrus sinensis; type=EST; length=322bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCTGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAATAAGCACTCTGAGTTCATTAGTAACCCAAGATCCCTCTGGATT
GAGAAGACCACTGAGAAGGAGATTTCTGATGATGAGGACGACGAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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