CB611182

Overview
NameCB611182
Unique NameCB611182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length322
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 4.432e-27
Identity = 56/83 (67.47%), Postives = 68/83 (81.93%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EY+EE+R+K+++ KHS+FI  P +L++
Sbjct:  135 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVKVD-HGEPIGRGTKVILHLKEDQTEYIEEKRVKEVVKKHSQFIGYPITLYV 216          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26
Identity = 57/83 (68.67%), Postives = 68/83 (81.93%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVAEKV V  KHNDDEQYIWES AGGSFTV  D  GE +GRGTK+ LHLKEDQ EY+EE+R+K+++ KHS+FI  P +L+I
Sbjct:  138 AYLVAEKVTVITKHNDDEQYIWESAAGGSFTVKPDF-GESIGRGTKVILHLKEDQSEYVEEKRIKEVVKKHSQFIGYPITLYI 219          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.684e-26
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSL 244
            AYLVA+KV V +K+N D+QY+WES A G FTV RD S EPL RGT++ LHLKEDQ EYLEERRLK+L+ KHSEFIS P SL
Sbjct:  134 AYLVADKVTVVSKNNADDQYVWESSASGHFTVKRDDSHEPLKRGTRLILHLKEDQTEYLEERRLKELVKKHSEFISFPISL 214          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 1.684e-26
Identity = 53/78 (67.95%), Postives = 67/78 (85.90%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNP 235
            AYLVA++V V +K+NDDEQYIWES AGG+FT+T+DT GE LGRGTKI LHLK++Q +YL E R+K+++ KHSEFIS P
Sbjct:  127 AYLVADRVTVVSKNNDDEQYIWESAAGGTFTLTQDTEGEQLGRGTKIILHLKDEQTDYLNESRIKEVVRKHSEFISYP 204          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.684e-26
Identity = 56/83 (67.47%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVA+KV VT+K+NDDEQYIWES AGGSFTV  D S EPLGRGTKI L++KEDQ +YLEE ++K+++NKHS+FI  P  L +
Sbjct:  129 AYLVADKVTVTSKNNDDEQYIWESSAGGSFTVRADNS-EPLGRGTKIVLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLV 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HS902_HUMAN (Putative heat shock protein HSP 90-alpha A2 OS=Homo sapiens GN=HSP90AA2 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 1.684e-26
Identity = 56/83 (67.47%), Postives = 67/83 (80.72%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GE +GRGTK+ LHLKEDQ EYLEE+R+K+++ KHS+ I  P +L++
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GERMGRGTKVILHLKEDQTEYLEEQRIKEIVKKHSQLIGYPITLFV 222          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_DROSI (Heat shock protein 83 (Fragment) OS=Drosophila simulans GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.200e-26
Identity = 55/83 (66.27%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVA+KV VT+K+NDDEQY+WES AGGSFTV  D S EPLGRGTKI L++KEDQ +YLEE ++K+++NKHS+FI  P  L +
Sbjct:  129 AYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADNS-EPLGRGTKIVLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLV 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.200e-26
Identity = 55/83 (66.27%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVA+KV VT+K+NDDEQY+WES AGGSFTV  D S EPLGRGTKI L++KEDQ +YLEE ++K+++NKHS+FI  P  L +
Sbjct:  129 AYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADNS-EPLGRGTKIVLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLV 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.752e-26
Identity = 57/81 (70.37%), Postives = 65/81 (80.25%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSL 244
            AYLVA+KV V +KHNDDEQYIWES AGGSFTVT DT G  L RGT+I L +KEDQL+YLEE+ +KD + KHSEFIS P  L
Sbjct:  128 AYLVADKVQVVSKHNDDEQYIWESSAGGSFTVTLDTDGPRLLRGTEIRLFMKEDQLQYLEEKTIKDTVKKHSEFISYPIQL 208          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 4.901e-26
Identity = 56/81 (69.14%), Postives = 66/81 (81.48%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSL 244
            AYLVA+KV V +K+N D+QY+WES A G FTV +D S EPL RGT++ LHLKEDQ EYLEERRLK+L+ KHSEFIS P SL
Sbjct:  134 AYLVADKVTVVSKNNADDQYVWESTASGHFTVKKDDSHEPLKRGTRLILHLKEDQTEYLEERRLKELVKKHSEFISFPISL 214          
The following BLAST results are available for this feature:
BLAST of CB611182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
HS90B_DANRE4.432e-2767.47Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
H90A1_DANRE1.290e-2668.67Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HSP90_THEAN1.684e-2670.37Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP90_ASPFU1.684e-2667.95Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]
HSP83_DROAV1.684e-2667.47Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HS902_HUMAN1.684e-2667.47Putative heat shock protein HSP 90-alpha A2 OS=Hom... [more]
HSP83_DROSI2.200e-2666.27Heat shock protein 83 (Fragment) OS=Drosophila sim... [more]
HSP83_DROME2.200e-2666.27Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP90_SCHPO3.752e-2670.37Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP90_THEPA4.901e-2669.14Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIIaF_H04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIIaF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611182 ID=CB611182; Name=CB611182; organism=Citrus sinensis; type=EST; length=322bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCTGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAATAAGCACTCTGAGTTCATTAGTAACCCAAGATCCCTCTGGATT
GAGAAGACCACTGAGAAGGAGATTTCTGATGATGAGGACGACGAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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