CB611182

Overview
NameCB611182
Unique NameCB611182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length322
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_DROVI (Heat shock protein 83 (Fragment) OS=Drosophila virilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.901e-26
Identity = 55/83 (66.27%), Postives = 68/83 (81.93%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVA+KV VT+K+NDDEQY+WES AGGSFTV  D S EPLGRGTKI L +KEDQ +YLEE ++K+++NKHS+FI  P  L +
Sbjct:  129 AYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADNS-EPLGRGTKIVLFIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLV 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.400e-26
Identity = 53/83 (63.86%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYL+A++V VT+K+NDDEQY+WES AGGSFTV  D S EPLGRGTKI L++KEDQ +YLEE ++K+++NKHS+FI  P  L +
Sbjct:  129 AYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADNS-EPLGRGTKIVLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLV 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_DROMI (Heat shock protein 83 (Fragment) OS=Drosophila miranda GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.359e-26
Identity = 53/83 (63.86%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYL+A++V VT+K+NDDEQY+WES AGGSFTV  D S EPLGRGTKI L++KEDQ +YLEE ++K+++NKHS+FI  P  L +
Sbjct:  129 AYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADNS-EPLGRGTKIXLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLV 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.359e-26
Identity = 54/81 (66.67%), Postives = 66/81 (81.48%), Query Frame = 2
Query:    8 LVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            L AEK++V  KHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI  P +L++
Sbjct:  117 LQAEKLVVITKHNDDEQYAWESSAGGSFTVHAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL 196          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.426e-25
Identity = 52/78 (66.67%), Postives = 67/78 (85.90%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNP 235
            AYL+A++V VT+K+NDDEQY+WES AGGSFTV  D S EPLGRGTKI L++KEDQ +YLEE ++K+++NKHS+FI  P
Sbjct:  129 AYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADNS-EPLGRGTKIXLYIKEDQTDYLEESKIKEIVNKHSQFIGYP 205          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.432e-25
Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSL 244
            AYLVA+ VIV +K+NDDEQY+WES AGG FT+  D + EPLGRGTKI LH+KEDQL+YL+E ++K+L+ KHSEFI  P SL
Sbjct:  131 AYLVADTVIVHSKNNDDEQYVWESSAGGEFTIALDHT-EPLGRGTKIVLHMKEDQLDYLDETKIKNLVKKHSEFIQYPISL 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.576e-24
Identity = 51/80 (63.75%), Postives = 64/80 (80.00%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSL 244
            +LVA+ V V +KHNDDEQY+WES AGG FTVT D + E LGRGT + L LKEDQLEYLEE+R+K+++ KHSEF++ P  L
Sbjct:  131 FLVADHVQVISKHNDDEQYVWESNAGGKFTVTLDETNERLGRGTMLRLFLKEDQLEYLEEKRIKEVVKKHSEFVAYPIQL 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.059e-24
Identity = 51/82 (62.20%), Postives = 66/82 (80.49%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            +LVA++V V +KHNDDEQYIWES AGGSFTVT D   E +GRGT + L LKEDQLEYLEE+R+K+++ +HSEF++ P  L +
Sbjct:  129 FLVADRVQVISKHNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKEDQLEYLEEKRIKEVVKRHSEFVAYPIQLLV 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.512e-24
Identity = 50/81 (61.73%), Postives = 65/81 (80.25%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLW 247
            YLVA+ V V +KHNDD+QY+WES+A GSF ++ DT  EPLGRGT+I LHL+++  EYLEE +LKDL+ K+SEFI+ P  LW
Sbjct:  204 YLVADYVEVVSKHNDDKQYVWESKADGSFAISEDTWNEPLGRGTEIKLHLRDEAKEYLEEGKLKDLVKKYSEFINFPIYLW 284          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.824e-24
Identity = 49/82 (59.76%), Postives = 65/82 (79.27%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLW 247
            AYLVA+ + V +KHNDD QY+WES+A G F V+ DT  EPLGRGT+I LHL+++  EYLEE +LK+L+ ++SEFI+ P SLW
Sbjct:  202 AYLVADYIEVISKHNDDSQYVWESKANGKFAVSEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRYSEFINFPISLW 283          
The following BLAST results are available for this feature:
BLAST of CB611182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
HSP83_DROVI4.901e-2666.27Heat shock protein 83 (Fragment) OS=Drosophila vir... [more]
HSP83_DROPS6.400e-2663.86Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP83_DROMI8.359e-2663.86Heat shock protein 83 (Fragment) OS=Drosophila mir... [more]
H90B3_HUMAN8.359e-2666.67Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
HSP83_DROPB1.426e-2566.67Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
HSC90_DICDI2.432e-2566.67Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP90_CANAL1.576e-2463.75Heat shock protein 90 homolog OS=Candida albicans ... [more]
HSP82_ASHGO2.059e-2462.20Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
ENPL_HORVU3.512e-2461.73Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
ENPL_ARATH7.824e-2459.76Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIIaF_H04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIIaF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611182 ID=CB611182; Name=CB611182; organism=Citrus sinensis; type=EST; length=322bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCTGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAATAAGCACTCTGAGTTCATTAGTAACCCAAGATCCCTCTGGATT
GAGAAGACCACTGAGAAGGAGATTTCTGATGATGAGGACGACGAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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