CB611182

Overview
NameCB611182
Unique NameCB611182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length322
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.071e-23
Identity = 50/80 (62.50%), Postives = 64/80 (80.00%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSL 244
            +LVA++V V +K NDDEQYIWES AGGSFTVT D   E +GRGT + L LK+DQLEYLEE+R+K++I +HSEF++ P  L
Sbjct:  128 FLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQL 207          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 106.301 bits (264), Expect = 5.071e-23
Identity = 49/82 (59.76%), Postives = 66/82 (80.49%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            +LVA++V V +K+N+DEQYIWES AGGSFTVT D   E +GRGT + L LK+DQLEYLEE+R+K++I +HSEF++ P  L +
Sbjct:  128 FLVADRVQVISKNNEDEQYIWESNAGGSFTVTLDEVNERIGRGTVLRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLLV 209          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.650e-23
Identity = 48/78 (61.54%), Postives = 61/78 (78.21%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNP 235
            AYLVA+KV V +K NDDEQYIWES AGG+F VT+D  G  +GRGTK+ LHLK++Q EYL E ++K+++ K SEFI  P
Sbjct:  127 AYLVADKVTVISKSNDDEQYIWESNAGGTFKVTQDDDGRAIGRGTKMILHLKDEQTEYLNESKIKEVVKKQSEFIFYP 204          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.130e-22
Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI 226
            AYLVA++V V +K+NDDE Y WES AGG+FTVT  T    L RGT+I LHLKEDQ EYLEERRLKDLI KHSEFI
Sbjct:  126 AYLVADRVTVVSKNNDDEAYTWESSAGGTFTVT-PTPDCDLKRGTRIVLHLKEDQQEYLEERRLKDLIKKHSEFI 199          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.927e-22
Identity = 48/78 (61.54%), Postives = 64/78 (82.05%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNP 235
            AYLVA++V V +K+NDDEQYIWES AGG+F ++ D +G  +GRGTKI LHLK++Q +YL E ++K++I KHSEFIS P
Sbjct:  126 AYLVADRVTVVSKNNDDEQYIWESSAGGTFNISPD-NGPSIGRGTKIILHLKDEQTDYLNESKIKEVIKKHSEFISYP 202          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_DROPE (Heat shock protein 83 (Fragment) OS=Drosophila persimilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.927e-22
Identity = 48/83 (57.83%), Postives = 65/83 (78.31%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYL+A++V VT+K+NDDEQY+WES   GSFT   D + EPL RGTKI L++KEDQ +YLEE ++K+++NKHS+FI  P  L +
Sbjct:  129 AYLIADRVTVTSKNNDDEQYVWESXXXGSFTXKAD-NXEPLXRGTKIXLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLV 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 4.293e-22
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI 226
            AYLVA++V VT+K+N DE Y+WES A G+FT+T  T    + RGT+ITLHLKEDQ+EYLE RRLK+LI KHSEFI
Sbjct:  126 AYLVADRVTVTSKNNSDESYVWESSACGTFTIT-STPESDMKRGTRITLHLKEDQMEYLEPRRLKELIKKHSEFI 199          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.607e-22
Identity = 52/75 (69.33%), Postives = 60/75 (80.00%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI 226
            AYLVA++V V +K+N+D+ Y WES AGG+FTVT  T    L RGT+I LHLKEDQ EYLEERRLKDLI KHSEFI
Sbjct:  126 AYLVADRVTVVSKNNEDDAYTWESSAGGTFTVT-STPDCDLKRGTRIVLHLKEDQQEYLEERRLKDLIKKHSEFI 199          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 7.323e-22
Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            A+LVA+KV+V +KHNDD+ Y WES AGGSF + R  +   L RGTKITL++KEDQ +YLEERR+K+++ KHS+FI  P  L +
Sbjct:  131 AFLVADKVVVASKHNDDDCYQWESSAGGSFII-RQVNDPELTRGTKITLYIKEDQTDYLEERRIKEIVKKHSQFIGYPIKLTV 212          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.131e-21
Identity = 45/81 (55.56%), Postives = 63/81 (77.78%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLW 247
            YLV + V V +KHNDD+QYIWES+A G+F ++ D   EPLGRGT+I LHL+++  EYL+E +LK+L+ ++SEFI+ P  LW
Sbjct:  204 YLVPDYVEVISKHNDDKQYIWESKADGAFAISEDVWNEPLGRGTEIRLHLRDEAQEYLDEFKLKELVKRYSEFINFPIYLW 284          
The following BLAST results are available for this feature:
BLAST of CB611182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
HSP82_YEAST5.071e-2362.50ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSC82_YEAST5.071e-2359.76ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP82_AJECA8.650e-2361.54Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
HSP85_TRYCR1.130e-2272.00Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP90_PODAN1.927e-2261.54Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP83_DROPE1.927e-2257.83Heat shock protein 83 (Fragment) OS=Drosophila per... [more]
HSP83_LEIIN4.293e-2266.67Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP83_TRYBB5.607e-2269.33Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP90_BRUPA7.323e-2257.83Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
ENPL_CATRO2.131e-2155.56Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIIaF_H04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIIaF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611182 ID=CB611182; Name=CB611182; organism=Citrus sinensis; type=EST; length=322bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCTGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAATAAGCACTCTGAGTTCATTAGTAACCCAAGATCCCTCTGGATT
GAGAAGACCACTGAGAAGGAGATTTCTGATGATGAGGACGACGAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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