CB611205

Overview
NameCB611205
Unique NameCB611205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length528
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB611205 vs. ExPASy Swiss-Prot
Match: RL262_ARATH (60S ribosomal protein L26-2 OS=Arabidopsis thaliana GN=RPL26B PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.671e-11
Identity = 37/87 (42.53%), Postives = 45/87 (51.72%), Query Frame = 1 
Query:   37 GPTRGARAKSFKCIAEKWVIDIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXXXXXXXXXXXXXTKFTPEDIMQSVD 297
            G  +G   K  +    KWVI IERITREKVNGSTVNVG+N S V+IT                           TKF+ ED+M++VD
Sbjct:   60 GTFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLERKANGRAAADKEKGTKFSAEDVMENVD 146
The following BLAST results are available for this feature:
BLAST of CB611205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
RL262_ARATH3.671e-1142.5360S ribosomal protein L26-2 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIIaF_E12 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIIaF_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611205 ID=CB611205; Name=CB611205; organism=Citrus sinensis; type=EST; length=528bp
GGGTGCGCAAGGACGACGAGGTTCAGGTTGTGCGTGGGACCTACAAGGGG
CGCGAGGGCAAAGTCGTTCAAGTGTATCGCCGAGAAGTGGGTCATTGATA
TCGAGCGCATCACTCGCGAGAAGGTTAATGGATCCACTGTGAATGTGGGA
ATCAACCCATCAAAGGTCGTGATCACCAAGCTCCGTCTGGACAAGGACAG
GAAGTCTTTGCTCGATCGCAAGGCCAAGGGACGTGCCGCCGCCGACAAGG
AGAAGGGTACCAAGTTCACCCCAGAGGATATTATGCAGAGCGTTGACTAA
TTTTGATAAGAGGTTGTTTTTAAAGTTTTTGTTTAATCATAGAATTTATG
GATTTAGGATGTTTTGTTTTGGCAATGTCACTAAGATATTTCTATTGTTA
TTGTGTTATGTCATGAGGATCCGATTATGGGCTTATGTTGGAGATTTAAG
ATACTTCTTTGGATTTTCTCCTCGTCGTTTCAATTTTAATTCTATATTCC
GAAAAAAAAAAAAAAAAAAAAAAAAAAA
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