CF417071
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.893e-54 Identity = 99/144 (68.75%), Postives = 114/144 (79.17%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQF 430 N AL +AGGWCNPP++HFD+SQP ++ IA YRAG+VPV YRRVPC R GGIRF +NGHSYF LVL+TNVGG+G V + IKGS TGW MSRNWG NWQSN L+GQ+LSF V DGR VT+ +VAPAGWSFG TY S AQF Sbjct: 107 NYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGWSFGATYTSSAQF 250
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 1.893e-54 Identity = 93/144 (64.58%), Postives = 116/144 (80.56%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 433 N A P++ GGWCNPP+ HFDL+ P+F IA+YRAG+VPV++RRVPC +RGGIRFTING YFNLVL+TNV GAG++ + +KG+ T W MSRNWGQNWQSN+ L GQSLSF VT+SD R+ TS+N+APA W FG+T+ G FR Sbjct: 113 NFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNFR 256
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 2.473e-54 Identity = 95/139 (68.35%), Postives = 112/139 (80.58%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 418 N ALP+N+GGWCNPP+QHFD+SQP +++IA Y+AG+VPV Y+RVPC R GGIRF I+GH YF LV +TNVGG+G V +SIKGS TGW MSRNWG NWQSN YL GQSLSF V DGR VT++NVAP+ W FG TYS Sbjct: 111 NWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNWFFGATYS 249
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.270e-50 Identity = 87/139 (62.59%), Postives = 107/139 (76.98%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 418 N ALPNN GGWCNPP +HFD++QP ++ I YR G+VPV ++RV C ++GG+RF ING YF LV I NVGGAG + +VSIKGS+TGW MSRNWG NWQSN YL+GQ+LSF +TT+DG T NV P+ WSFG+ YS Sbjct: 109 NFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSWSFGQIYS 247
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.166e-50 Identity = 85/140 (60.71%), Postives = 112/140 (80.00%), Query Frame = 2 Query: 14 PNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQF 430 P+N GGWCNPP+QHFD++QP ++ I YR G+VPV ++RV C R+GG+RFTING+SYF LVLITNVGG G + +V IKG++TGW MSRNWG NWQ+N YLN Q++SF VT++ G+T+ +VAP+ W FG+T+ SG QF Sbjct: 110 PSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQTFTSGVQF 249
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.395e-49 Identity = 87/139 (62.59%), Postives = 108/139 (77.70%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 418 N A ++AGGWCNPP++HFD+SQP + IA Y+AG+VPV ++RVPC + GGIRFTI+G YF LV + NVGG+G V VSIKGS+T W MSRNWGQNWQSN YLN QSLSF+V D R VT +N+AP+ W+FG TY+ Sbjct: 105 NYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNWNFGTTYT 243
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 7.704e-48 Identity = 82/144 (56.94%), Postives = 105/144 (72.92%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR--TGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 427 N ALP++ GGWCNPP+ HFD++QP ++ I YR G+VPVA+RRVPC RRGG+RFT+ G YF LVL+TNV AG V ++ ++GSR GW MSRNWG NWQS YL+GQ LSF VT +DG+T+ V P W FG+T++ Q Sbjct: 117 NYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSWRFGQTFASTQ 260
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 1.716e-47 Identity = 84/139 (60.43%), Postives = 106/139 (76.26%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 418 N ALP++ GGWCNPP++HFD+SQP ++ I YRAG+VPV YRRV C RRGG+RFT+ G +F LVL+ NV G+G V AVS++G+ TGW MSRNWG NWQS L GQ LSF VTT+ G+ + +VAPAGW FG+T+S Sbjct: 110 NWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGWKFGQTFS 248
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 3.823e-47 Identity = 84/138 (60.87%), Postives = 101/138 (73.19%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY 415 N + +AGGWCNPP++HFD+SQP ++ IA Y +G+VPV Y R PC R GGIRF I GH Y+ LVL+TNV G+G V A +KGS T W MSRNWG+NWQSN YL GQ+LSF V DG VT+Y+VAPA W FG TY Sbjct: 109 NYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANWQFGSTY 246
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.112e-46 Identity = 81/143 (56.64%), Postives = 106/143 (74.13%), Query Frame = 2 Query: 11 LPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQFR 433 LP++ GGWCNPP+ HFD++QP ++ I YRAG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ I GS T W PM RNWG NW S +YL GQ LSF VT DG+T+ N+ P+GW FG+T+ S QF+ Sbjct: 136 LPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFASKLQFK 278 The following BLAST results are available for this feature:
BLAST of CF417071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417071 ID=CF417071; Name=CF417071; organism=Citrus sinensis; type=EST; length=662bpback to top |