CF417071
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.453e-46 Identity = 81/142 (57.04%), Postives = 109/142 (76.76%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 427 N AL N+ GGWCNPP+ HFD+SQP ++ I YRAG+VPV Y++V C R+GG+RFT++G +YF LVLITNV G+G V A+S+KGS+TGW P++RNWG NWQ N+ L GQ+LSF VT++ G+T+ +V P W FG T++ Q Sbjct: 110 NWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWWEFGTTFTSNQ 251
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 4.227e-46 Identity = 80/143 (55.94%), Postives = 106/143 (74.13%), Query Frame = 2 Query: 11 LPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQFR 433 LP++ GGWCNPP+ HFD++QP ++ I Y AG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ I GS T W PM RNWG NW S +YL GQ+LSF VT DG+T+ N+ P+GW FG+T+ S QF+ Sbjct: 120 LPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGWKFGQTFTSKLQFK 262
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 7.211e-46 Identity = 80/143 (55.94%), Postives = 106/143 (74.13%), Query Frame = 2 Query: 11 LPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQFR 433 LP++ GGWCNPP+ HFD++QP ++ I YRAG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ + GS T W PM RNWG NW S +YL GQ LSF VT DG+T+ N+ P+GW FG+T+ S QF+ Sbjct: 138 LPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFASKLQFK 280
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.098e-45 Identity = 80/143 (55.94%), Postives = 104/143 (72.73%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGS-RTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 427 N N+ GGWCNPP++HFDLS P F IAQ +AG+VP++YRRVPC + GGIR+TI G+ YFNLV+++NVGGAGDV +S+KG+ R W P+ RNWGQ WQ++ L G+SL+F V T D R TS++V P W FG TY + Sbjct: 124 NPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDWQFGVTYQATK 266
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 2.098e-45 Identity = 77/142 (54.23%), Postives = 109/142 (76.76%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 427 N ALP+N+GGWCNPP+ HFD+++P + I Y+AG++PV Y++V C R+GGIRFT+ G ++F LVL++NV G+G V +VS+KG TGW ++RNWG NWQ N+ L GQ+LSF VT++ G+T+ YNV P+ WSFG T++ Q Sbjct: 110 NWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWWSFGMTFTSNQ 251
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 4.674e-45 Identity = 83/142 (58.45%), Postives = 106/142 (74.65%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 427 N ALP++ GGWCNPP+ HFD+SQP ++ I Y+AG+VPV Y+RV C R+GG+RFT+ G +YF LVLITNV G+G V + IKG+ TGW MSRNWG NWQS L GQ+LSF VTT+ G+ + +VAPA W FG+T+S Q Sbjct: 111 NWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWWQFGQTFSTYQ 252
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 6.104e-45 Identity = 78/143 (54.55%), Postives = 103/143 (72.03%), Query Frame = 2 Query: 11 LPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQFR 433 LP++ GGWCNPP+ HFD++QP ++ I Y AG++PV Y+RVPC ++GG+RFTINGH YF LVL+TNV AG + ++ + GS T W PM+RNWG W S YL GQ LSF VT +D +T+ NV P GW FG+T+ S QF+ Sbjct: 125 LPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGWKFGQTFASKLQFK 267
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 6.104e-45 Identity = 78/143 (54.55%), Postives = 105/143 (73.43%), Query Frame = 2 Query: 11 LPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQFR 433 LP+++GGWCNPP+ HFD++QP ++ I YR G++PV Y+RVPC ++GG+RFTINGH YF LVL+TNVG AG + A+ +KGS++ W M+ NWG W S YL GQ LSF VT +DG+T+ NV GW FG+T+ S QF+ Sbjct: 120 LPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGWRFGQTFASNIQFK 262
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.041e-44 Identity = 80/139 (57.55%), Postives = 106/139 (76.26%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY 415 N A ++ GGWCNPP+ HFD++QP F IA+Y+AG+VP+ Y++V C R GG+RFTING +YF LVLI+NV G G++ V IKGS++ W+ MSRNWG N+QSNTYLNGQSLSF+V SDG + NV P+ W FG+++ Sbjct: 111 NFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRFGQSF 249
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 2.320e-44 Identity = 82/143 (57.34%), Postives = 103/143 (72.03%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 430 N LP +AGG CNPP HF L F+ IA ++AGV+P+ YRRV C R GG+RF + G S+F VLI+NVGGAGDV +V IKG+ +GW M RNWGQ W N+ GQ LSFE+T+SDG+T+T+YNV P W FG+TY+G QF Sbjct: 113 NFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEWDFGKTYTGKQF 255 The following BLAST results are available for this feature:
BLAST of CF417071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417071 ID=CF417071; Name=CF417071; organism=Citrus sinensis; type=EST; length=662bpback to top |