CF417071
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.167e-44 Identity = 80/141 (56.74%), Postives = 109/141 (77.30%), Query Frame = 2 Query: 17 NNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTT-SDGRTVTSYNVAPAGWSFGRTY-SGAQFR 433 +NAGGWCNPP+ HFD+++P F +A +RAG++PVAYRRVPC R GG+RF G+SY+ L+ + NVGGAGD+ ++++KGSRT W MS NWG ++Q+ + L GQSLSF VT+ + G T+ ++NVAPA WS G+TY S A FR Sbjct: 122 SNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANWSGGKTYKSTANFR 262
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 6.749e-44 Identity = 77/130 (59.23%), Postives = 96/130 (73.85%), Query Frame = 2 Query: 32 WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSG 421 WCNPPQ+HFDLS +F IA+Y+AGVVPV YRR+PC + GG++F G+ YF +VLI NVGGAGD+ V +KG++TGW M +NWGQNW + T L GQ LSF VTTSDG T +NV P W FG+T+ G Sbjct: 140 WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDG 269
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.565e-43 Identity = 80/143 (55.94%), Postives = 103/143 (72.03%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 430 N+ L ++ GGWCN P++H +LS F IA+ RA ++P+ YRRV CGRRGG+RF+++G S+F VLI+NVG G+V V +KG T W PM+RNWGQNW S+ L GQSLSFEVT G+T+ SY+VAP W FG TY G QF Sbjct: 112 NSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFGMTYQGKQF 254
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 4.375e-43 Identity = 75/130 (57.69%), Postives = 96/130 (73.85%), Query Frame = 2 Query: 32 WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSG 421 WCNPPQ+HFDLS +F IA+Y+AGVVPV YRR+PC + GG++F G+ YF +VLI NVGGAGD+ V +K ++TGW M +NWGQNW ++T L GQ LSF VTT+DG T +NV P W FG+T+ G Sbjct: 146 WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNWGFGQTFDG 275
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.713e-43 Identity = 80/143 (55.94%), Postives = 101/143 (70.63%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 430 N L ++ GGWCN P++HF++S+ F +A+ +A +VPV +RRV C R GG+RFTI G + F VLITNV G+V AV +KGSRTGW PM RNWGQNWQ + L GQ LSFEVT GRTV +Y+VAP W F +T+ G QF Sbjct: 116 NLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDWMFAQTFEGKQF 258
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 5.713e-43 Identity = 80/143 (55.94%), Postives = 100/143 (69.93%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 430 N + GG CNPP +HF L F+ IA ++AG +PV YRR+ C + G +RFT++G F VLITNV G+GD+ AV IKGSRTGW PM RNWGQNW N L Q+LSFEVT+SD TVTSYNV+P W++G+T+ G QF Sbjct: 121 NYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQF 263
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.273e-42 Identity = 75/132 (56.82%), Postives = 93/132 (70.45%), Query Frame = 2 Query: 26 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSG 421 G WCNPPQ+HFDLS P+F IAQY+AGVVPV YRR+ C R GG++F G+ YF ++L NVGGAGD+ + +KG +TGW M +NWGQNW + L GQ +SF VTTSDG T NV P W FG+T+ G Sbjct: 141 GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 272
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.273e-42 Identity = 75/132 (56.82%), Postives = 93/132 (70.45%), Query Frame = 2 Query: 26 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSG 421 G WCNPPQ+HFDLS P+F IAQY+AGVVPV YRR+ C R GG++F G+ YF ++L NVGGAGD+ + +KG +TGW M +NWGQNW + L GQ +SF VTTSDG T NV P W FG+T+ G Sbjct: 134 GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 265
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 2.171e-42 Identity = 73/139 (52.52%), Postives = 104/139 (74.82%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 418 N AL +N GGWCNPP+ HFD+++P + I Y+AG+VPV Y+RVPC ++GG+RFT+ G +YF LVLI+NV G+G + +V +KG T P+SRNWG NWQS+ L GQ+L+F VT++ G+T+ N+ PA W FG+++S Sbjct: 115 NYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWWKFGQSFS 253
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.077e-41 Identity = 74/134 (55.22%), Postives = 100/134 (74.63%), Query Frame = 2 Query: 26 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 427 GGWCN + HFD+SQP +++I Y AG+VP+ Y++V C R GG+RFTI G +YF LVL+TN+ G+G + ++S+KGS TGW MSRNWG NWQ L GQ+LSF VT++ G+T+ +V PAGWSFG+T+S Q Sbjct: 112 GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGWSFGQTFSTYQ 245 The following BLAST results are available for this feature:
BLAST of CF417071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417071 ID=CF417071; Name=CF417071; organism=Citrus sinensis; type=EST; length=662bpback to top |