CF417075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.496e-34 Identity = 46/112 (41.07%), Postives = 69/112 (61.61%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K G + +T+LI G+ +DK++ HP MPKR+ENAKIA++ E + +T ++ I + E+ Q +QE++ +MV K K+VGA +V Q G DD A H L + AVR V Sbjct: 205 KEGASVHETQLIRGVVIDKEVVHPGMPKRVENAKIALINDALEVKETETDAEIRITSPEQLQAFLEQEERMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRV 316 HSP 2 Score: 75.0998 bits (183), Expect = 1.496e-34 Identity = 35/95 (36.84%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E +A ATG +IV ++LTPE LG+A LV ++ + M+++E C N +AVTI IRGG + +++E +R++ DA+ V ++++ + I+ G Sbjct: 320 DMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRK--VAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGG 412
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 9.510e-34 Identity = 45/112 (40.18%), Postives = 68/112 (60.71%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K G +E++EL+ G+ +DK++ HP+MPKR+ENAKIA++ E K +T K++I + ++ + +QE+K DMV GA +V Q G DD A H L + AVR V Sbjct: 205 KAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRV 316 HSP 2 Score: 73.1738 bits (178), Expect = 9.510e-34 Identity = 35/95 (36.84%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E +A ATG +IV ++LTPE LG A +V E+ + M+++E C N +AVTI IRGG + +I+E +R++ DA+ V ++++ + +++ G Sbjct: 320 DMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAG--ENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGG 412
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 9.510e-34 Identity = 45/112 (40.18%), Postives = 68/112 (60.71%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K G +E++EL+ G+ +DK++ HP+MPKR+ENAKIA++ E K +T K++I + ++ + +QE+K DMV GA +V Q G DD A H L + AVR V Sbjct: 205 KAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRV 316 HSP 2 Score: 73.1738 bits (178), Expect = 9.510e-34 Identity = 35/95 (36.84%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E +A ATG +IV ++LTPE LG A +V E+ + M+++E C N +AVTI IRGG + +I+E +R++ DA+ V ++++ + +++ G Sbjct: 320 DMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAG--ENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGG 412
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.239e-33 Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K G +++TELI G+ +DK+ PQMPK+IENAKIA+L CP E + +T ++ I K +QE+K DMV K GA ++ CQ G DD A H L + AVR V Sbjct: 200 KEGASVDETELINGVLIDKERVSPQMPKKIENAKIALLNCPIEVKETETDAEIRITDPTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQKGIDDLAQHYLAKEGILAVRRV 311 HSP 2 Score: 68.5514 bits (166), Expect = 1.239e-33 Identity = 35/95 (36.84%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E ++ ATG +V ++L E LG+AG+V E+ D M+++E C + +AVT+ IRG + +IEE R++ DA+ V I + IV G G Sbjct: 315 DMEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIAG--DAMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGG 407
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.563e-33 Identity = 44/112 (39.29%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K G +E++EL+ G+ +DK++ HP+MPKR+E AKIA++ E K +T K++I + ++ + +QE+K DMV GA +V Q G DD A H L + AVR V Sbjct: 205 KAGEGVEESELVRGVVIDKEVVHPRMPKRVEGAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRV 316 HSP 2 Score: 73.559 bits (179), Expect = 3.563e-33 Identity = 35/95 (36.84%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E +A ATG +IV ++LTPE LG A +V E+ + M+++E C N +AVTI IRGG + +I+E +R++ DA+ V ++++ + +++ G Sbjct: 320 DMEKLAKATGAKIVTNVKDLTPEDLGYAEIVEERKLAG--ENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGG 412
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.176e-31 Identity = 47/112 (41.96%), Postives = 62/112 (55.36%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K GG + DT+ I GI +DK+ H +MP ++NAKIA++ E K + + KV I K Q QE F MV+K K GA +V+CQ G DD A H L + AVR V Sbjct: 202 KNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRV 313 HSP 2 Score: 68.1662 bits (165), Expect = 3.176e-31 Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E +A ATG +IV +LTP LG+A V E+ G DRM ++ C N +AV+I IRGG ++ E +R+++DA+ V + ++G G Sbjct: 317 DMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIG--DDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGG 409
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.033e-28 Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K GG ++DT+LI GI VDK+ HP MP +++AKIA+L P E KP+ + I+ Q QE+ +MV K K VGA +VI Q G DD A H L + AVR V Sbjct: 203 KQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRV 314 HSP 2 Score: 56.225 bits (134), Expect = 3.033e-28 Identity = 30/95 (31.58%), Postives = 53/95 (55.79%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +++ +A ATG IV E++ LG A V + G +D M ++ C N +AV+I +RG + +++E +RSI D+L V + + + + G G Sbjct: 318 DMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVG--EDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGG 410
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THSA_METTH (Thermosome subunit alpha OS=Methanobacterium thermoautotrophicum GN=thsA PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.712e-28 Identity = 40/110 (36.36%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 G + ++ ++ GI +DK + MPKRIE A+IA+L P E +T K+ + + Q +QE++ DMV+K K GA +V CQ G DD A H L + A++ V Sbjct: 200 GASVNESRIVNGIVIDKSRADTSMPKRIEKARIALLKYPIEVKDLETDAKIRLTDPSQMQAFIEQEEQMIRDMVEKIKSSGANVVFCQKGIDDLALHYLSREGIMALKRV 309 HSP 2 Score: 65.4698 bits (158), Expect = 8.712e-28 Identity = 32/95 (33.68%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +++ I ATG R+V +LT E LG+AG++ EK + + +IE C + +A++I +RG K + EE +R++ DA+ V + + + +V G G Sbjct: 313 DIKRIEKATGARLVTNIDDLTAEDLGEAGVIYEKKI--FDEVLTFIEECRDPKAISIILRGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGG 405
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.074e-24 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 3 Query: 6 VGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVR 332 VGG ++++EL+ G+ VDK+ MP +E+A IAIL E + + +V++ ++ Q QE+K +MV + +VGA V G DD A H L + AVR Sbjct: 204 VGGTIDNSELVEGVIVDKERVDENMPYAVEDANIAILDDALEVRETEIDAEVNVTDPDQLQQFLDQEEKQLKEMVDQLVEVGADAVFVGDGIDDMAQHYLAKEGILAVR 312 HSP 2 Score: 64.6994 bits (156), Expect = 1.074e-24 Identity = 31/95 (32.63%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +L+ +A ATGGR+V ++ + LG AG V +K G D +++E ++++VT+ +RGG + +++E +R+I D+L V R + + ++ G G Sbjct: 318 DLKRLARATGGRVVSSLDDIEADDLGFAGSVGQKDVG--GDERIFVEDVEDAKSVTLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPGGG 410
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.532e-23 Identity = 34/110 (30.91%), Postives = 63/110 (57.27%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 GG +ED+ ++ G+ ++KD++HP+M + I+N +I +L E K +++ ++I E F + Q E++Y + + + +VI + G D A H LM N+ A+R V Sbjct: 206 GGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRV 315 HSP 2 Score: 59.3066 bits (142), Expect = 2.532e-23 Identity = 35/92 (38.04%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 361 IAIATGGRIVPRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 IA A G RIV R +EL E +G AGL+ K G + +I C + +A TI +RG +K ++ E +R++ DA+ V RN++ + +V G G Sbjct: 323 IARACGARIVSRPEELREEDVGTGAGLLEIKKIG--DEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGG 412 The following BLAST results are available for this feature:
BLAST of CF417075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417075 ID=CF417075; Name=CF417075; organism=Citrus sinensis; type=EST; length=639bpback to top |