CF417077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10L_MOUSE (60S ribosomal protein L10-like OS=Mus musculus GN=Rpl10l PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.892e-74 Identity = 94/121 (77.69%), Postives = 101/121 (83.47%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGM G F K Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 121 HSP 2 Score: 100.908 bits (250), Expect = 2.892e-74 Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLEVEVGEQDCPXWC 633 RGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ ++ + ++ P C Sbjct: 116 RGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDKVAAKRLIPDGC 195
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_SHEEP (60S ribosomal protein L10 OS=Ovis aries GN=RPL10 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 3.772e-74 Identity = 94/121 (77.69%), Postives = 101/121 (83.47%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGM G F K Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 121 HSP 2 Score: 100.523 bits (249), Expect = 3.772e-74 Identity = 51/74 (68.92%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLEVEVGEQ 615 RGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ AD E V E+ Sbjct: 116 RGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFN-ADEFENMVAEK 188
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_PIG (60S ribosomal protein L10 OS=Sus scrofa GN=RPL10 PE=2 SV=3) HSP 1 Score: 199.134 bits (505), Expect = 3.772e-74 Identity = 94/121 (77.69%), Postives = 101/121 (83.47%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGM G F K Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 121 HSP 2 Score: 100.523 bits (249), Expect = 3.772e-74 Identity = 51/74 (68.92%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLEVEVGEQ 615 RGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ AD E V E+ Sbjct: 116 RGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFN-ADEFENMVAEK 188
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_BOVIN (60S ribosomal protein L10 OS=Bos taurus GN=RPL10 PE=2 SV=4) HSP 1 Score: 199.134 bits (505), Expect = 3.772e-74 Identity = 94/121 (77.69%), Postives = 101/121 (83.47%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGM G F K Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 121 HSP 2 Score: 100.523 bits (249), Expect = 3.772e-74 Identity = 51/74 (68.92%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLEVEVGEQ 615 RGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ AD E V E+ Sbjct: 116 RGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFN-ADEFENMVAEK 188
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10L_BOVIN (60S ribosomal protein L10-like OS=Bos taurus GN=RPL10L PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 4.920e-74 Identity = 94/121 (77.69%), Postives = 101/121 (83.47%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGM G F K Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 121 HSP 2 Score: 100.138 bits (248), Expect = 4.920e-74 Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLEVEVGEQ 615 RGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ AD E +V ++ Sbjct: 116 RGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFN-ADEFEDKVAKK 188
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_BOMMA (60S ribosomal protein L10 OS=Bombyx mandarina GN=RpL10 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 3.157e-73 Identity = 93/121 (76.86%), Postives = 103/121 (85.12%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MGRRPARCYR KNKPYPKSRFCRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +SSEALEA RI CNKY+ K GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGM G F K Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 121 HSP 2 Score: 93.2041 bits (230), Expect = 3.157e-73 Identity = 45/66 (68.18%), Postives = 51/66 (77.27%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADY 591 RGAFGKPQGT ARV IGQ ++SVR D EALRRAKFKFPGRQKI VS+KWGFTK+ R ++ Sbjct: 116 RGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEF 181
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_MACFA (60S ribosomal protein L10 OS=Macaca fascicularis GN=RPL10 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.371e-73 Identity = 93/121 (76.86%), Postives = 100/121 (82.64%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MGRRPAR YR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGM G F K Sbjct: 1 MGRRPARRYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 121 HSP 2 Score: 101.293 bits (251), Expect = 5.371e-73 Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLEVEVGEQDCPXWC 633 RGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ ++ ++ ++ P C Sbjct: 116 RGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGC 195
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10L_HUMAN (60S ribosomal protein L10-like OS=Homo sapiens GN=RPL10L PE=1 SV=3) HSP 1 Score: 193.356 bits (490), Expect = 5.371e-73 Identity = 92/121 (76.03%), Postives = 100/121 (82.64%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP H+VS E E +SSEALEAARI NKYM K G+D FH+RVR+HPFHV+RINKMLSCAGADRLQTGM G F K Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLGGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 121 HSP 2 Score: 102.449 bits (254), Expect = 5.371e-73 Identity = 52/92 (56.52%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLEVEVGEQDCPXWCECXAFSGCHGPL 669 RGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ ++ ++ + P C + HGPL Sbjct: 116 RGAFGKPQGTVARVHIGQVIMSIRTKLQNEEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAKKCLIPDGCG-VKYVPSHGPL 206
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_CHICK (60S ribosomal protein L10 (Fragment) OS=Gallus gallus GN=RPL10 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 7.647e-72 Identity = 89/115 (77.39%), Postives = 96/115 (83.48%), Query Frame = 3 Query: 66 RCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 RCYR KNKPYPKSRFCRGVPDPKIRI+D+G KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGM G F K Sbjct: 2 RCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 116 HSP 2 Score: 102.064 bits (253), Expect = 7.647e-72 Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLEVEVGEQDCPXWCECXAFSGCHGPL 669 RGAFGKPQGT ARV +GQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ + E+ ++ P C G GPL Sbjct: 111 RGAFGKPQGTVARVHMGQVIMSIRTKAQNKEHVVEALRRAKFKFPGRQKIHISKKWGFTKFNADAFEEMVAQKRLIPDGCGVKYVPG-RGPL 201
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_DICDI (60S ribosomal protein L10 OS=Dictyostelium discoideum GN=rpl10 PE=3 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 1.300e-71 Identity = 92/121 (76.03%), Postives = 104/121 (85.95%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MGRRPARCYR KNKPY KSR+CRGVPD KIRI+D+G KK DEFP CVHL+S EKE +SSEA+EA RI+CNKY++K GKD+FH+RVRVHP+HVLRINKMLSCAGADRLQTGM G F K Sbjct: 1 MGRRPARCYRYCKNKPYIKSRYCRGVPDAKIRIFDLGRKKASTDEFPLCVHLISLEKEQLSSEAIEAGRISCNKYISKTGGKDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAFGK 121 HSP 2 Score: 90.5077 bits (223), Expect = 1.300e-71 Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLEVEVGEQDCPXWCECXAFSGCHGPLAQ 675 RGAFGKP GT ARV IGQ++ S+R +D+ + EALRR+ +KFPGRQKI+VS+KWGFT ++R Y +++ + + HG LAQ Sbjct: 116 RGAFGKPMGTVARVNIGQIIFSIRTRDNMLANVVEALRRSSYKFPGRQKIVVSKKWGFTAYNREAYQKLKADGRLMNDGANVKVITN-HGTLAQ 208 The following BLAST results are available for this feature:
BLAST of CF417077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417077 ID=CF417077; Name=CF417077; organism=Citrus sinensis; type=EST; length=703bpback to top |