CF417078 | Citrus Genome Database

Overview


Name	CF417078
Unique Name	CF417078
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	708

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.095e-61
Identity = 131/234 (55.98%), Postives = 156/234 (66.67%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPS-------GV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            KR MMYQQGCFAGGTVLRLAKDLAENNKGARVL+VCSEIT VTFRGP++THLDSLVGQALF            P T  E+PL+QLVS +QT+ PDS GAIDGHLREVGLTFHLLKDVP ++S NIEK L EAF PLGISDWNS+FWIA P      GP+        +   P++  A  H  S      ++   C++    + ++    +      +GL     FGFGPGLT++
Sbjct:  155 KRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQALFGDGAAAVIVGADP-TPAEKPLFQLVSAAQTLAPDSCGAIDGHLREVGLTFHLLKDVPSVVSNNIEKCLFEAFNPLGISDWNSVFWIAHP-----GGPAILDQVEDKLGLKPEKLRATRHVLS---EYGNMSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIE 379

HSP 2 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 47/87 (54.02%), Postives = 48/87 (55.17%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE           ATR VLSEYGNMSSACVLFILDEMRK S      T                    +TVVLHSVP
Sbjct:  302 HPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNAGLGT-TGEGLEWGVLFGFGPGLTIETVVLHSVP 387

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHSD_IPONI (Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.191e-60
Identity = 132/234 (56.41%), Postives = 154/234 (65.81%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPS-------GV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            KR MMYQQGCFAGGTVLR+AKDLAENNK ARVLVVCSEIT VTFRGP +THLDSLVGQALF            P T  E+PL+QLVS +QT+ PDS GAIDGHLREVGLTFHLLKDVP ++S NIEK LSEAF PLGISDWNSIFWIA P      GP+        +   P++  A  H  S      ++   C++    + ++           +GL     FGFGPGLT++
Sbjct:  155 KRLMMYQQGCFAGGTVLRVAKDLAENNKAARVLVVCSEITVVTFRGPNETHLDSLVGQALFGDGAAAIIVGSDP-TPAEKPLFQLVSAAQTLAPDSCGAIDGHLREVGLTFHLLKDVPSIVSNNIEKCLSEAFNPLGISDWNSIFWIAHP-----GGPAILDQVEDKLGLKPEKLRATRHVLS---EYGNMSSACVLFILDEMRKASSNDGLGTTGEGLEWGVLFGFGPGLTIE 379

HSP 2 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 47/87 (54.02%), Postives = 49/87 (56.32%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE           ATR VLSEYGNMSSACVLFILDEMRK S  +   T                    +TVVLHSVP
Sbjct:  302 HPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNDGLGT-TGEGLEWGVLFGFGPGLTIETVVLHSVP 387

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.556e-60
Identity = 130/234 (55.56%), Postives = 156/234 (66.67%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPS-------GV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            KR MMYQQGCFAGGTVLRLAKDLAENNKGARVL+VCSEIT VTFRGP++THLDSLVGQALF            P T  E+PL+QLVS +QT+ P+S GAIDGHLREVGLTFHLLKDVP ++S NIEK L EAF PLGISDWNS+FWIA P      GP+        +   P++  A  H  S      ++   C++    + ++    +      +GL     FGFGPGLT++
Sbjct:  155 KRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQALFGDGAAAVIVGADP-TPAEKPLFQLVSAAQTLAPNSCGAIDGHLREVGLTFHLLKDVPSVVSNNIEKCLFEAFNPLGISDWNSVFWIAHP-----GGPAILDQVEDKLGLKPEKLRATRHVLS---EYGNMSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIE 379

HSP 2 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 47/87 (54.02%), Postives = 48/87 (55.17%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE           ATR VLSEYGNMSSACVLFILDEMRK S      T                    +TVVLHSVP
Sbjct:  302 HPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNAGLGT-TGEGLEWGVLFGFGPGLTIETVVLHSVP 387

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS6_PEA (Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.556e-60
Identity = 127/231 (54.98%), Postives = 156/231 (67.53%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQ----RGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            KR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF PL I D+NSIFWIA P      GP+ +    +    + E    T  V     ++   C++    + ++           +GL     FGFGPGLT++
Sbjct:  155 KRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPLPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNINKALVEAFQPLNIDDYNSIFWIAHP-----GGPAILDQVEEKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQQGLKTTGEGLDWGVLFGFGPGLTIE 380

HSP 2 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 47/86 (54.65%), Postives = 51/86 (59.30%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSV 703
            HPGGPAILDQVE           ATR+VLSEYGNMSSACVLFILDEMRKKS ++   T                    +TVVLHSV
Sbjct:  303 HPGGPAILDQVEEKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQQGLKT-TGEGLDWGVLFGFGPGLTIETVVLHSV 387

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.556e-60
Identity = 130/234 (55.56%), Postives = 156/234 (66.67%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPS-------GV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            KR MMYQQGCFAGGTVLRLAKDLAENNKGARVL+VCSEIT VTFRGP++THLDSLVGQALF            P T  E+PL+QLVS +QT+ P+S GAIDGHLREVGLTFHLLKDVP ++S NIEK L EAF PLGISDWNS+FWIA P      GP+        +   P++  A  H  S      ++   C++    + ++    +      +GL     FGFGPGLT++
Sbjct:  155 KRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQALFGDGAAAVIVGADP-TPAEKPLFQLVSAAQTLAPNSCGAIDGHLREVGLTFHLLKDVPSVVSNNIEKCLFEAFNPLGISDWNSVFWIAHP-----GGPAILDQVEDKLGLKPEKLRATRHVLS---EYGNMSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIE 379

HSP 2 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 46/86 (53.49%), Postives = 47/86 (54.65%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSV 703
            HPGGPAILDQVE           ATR VLSEYGNMSSACVLFILDEMRK S      T                    +TVVLHSV
Sbjct:  302 HPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNAGLGT-TGEGLEWGVLFGFGPGLTIETVVLHSV 386

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS4_IPOBA (Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.556e-60
Identity = 130/234 (55.56%), Postives = 155/234 (66.24%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPS-------GV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            KR MMYQQGCFAGGTVLRLAKDLAENNKGARVL+VCSEIT VTFRGP++THLDSLVGQALF            P T  E+PL+QLVS +Q + PDS GAIDGHLREVGLTFHLLKDVP ++S NIEK L EAF PLGISDWNS+FWIA P      GP+        +   P++  A  H  S      ++   C++    + ++    +      +GL     FGFGPGLT++
Sbjct:  155 KRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQALFGDGAAAVIVGADP-TPAEKPLFQLVSAAQNLAPDSCGAIDGHLREVGLTFHLLKDVPSVVSNNIEKCLFEAFNPLGISDWNSVFWIAHP-----GGPAILDQVEDKLGLKPEKLRATRHVLS---EYGNMSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIE 379

HSP 2 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 47/87 (54.02%), Postives = 48/87 (55.17%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE           ATR VLSEYGNMSSACVLFILDEMRK S      T                    +TVVLHSVP
Sbjct:  302 HPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNAGLGT-TGEGLEWGVLFGFGPGLTIETVVLHSVP 387

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.556e-60
Identity = 127/231 (54.98%), Postives = 158/231 (68.40%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQ----RGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            KR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHL E GLTFHLLKDVPG++SKNI+K+L EAF PL ISD+NSIFWIA P      GP+ +    +    + E    T  V     ++   C++    + ++    +      +GL     FGFGPGLT++
Sbjct:  155 KRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLVEAGLTFHLLKDVPGIVSKNIDKALIEAFQPLNISDYNSIFWIAHP-----GGPAILDQVEEKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQAGLKTTGEGLDWGVLFGFGPGLTIE 380

HSP 2 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 47/86 (54.65%), Postives = 50/86 (58.14%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSV 703
            HPGGPAILDQVE           ATR+VLSEYGNMSSACVLFILDEMRKKS +    T                    +TVVLHSV
Sbjct:  303 HPGGPAILDQVEEKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQAGLKT-TGEGLDWGVLFGFGPGLTIETVVLHSV 387

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS3_IPOBA (Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF3 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.032e-60
Identity = 130/234 (55.56%), Postives = 154/234 (65.81%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPS-------GV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            KR MMYQQGCFAGGTVLRLAKDLAENNKGARVL+VCSEIT VTFRGP++ HLDSLVGQALF            P T  E+PL+QLVS +QT+ PDS GAIDGHLREVGLTFHLLKDVP ++S NIEK L EAF PLGISDWNS+FWIA P      GP+        +   P++  A  H  S      ++   C++    + ++           +GL     FGFGPGLT++
Sbjct:  155 KRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSEAHLDSLVGQALFGDGAAAVIVGADP-TPAEKPLFQLVSAAQTLAPDSCGAIDGHLREVGLTFHLLKDVPSVVSNNIEKCLFEAFNPLGISDWNSVFWIAHP-----GGPAILDQVEDKLGLKPEKLRATRHVLS---EYGNMSSACVLFILDEMRKASSNDGLGTTGEGLEWGVLFGFGPGLTIE 379

HSP 2 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 47/87 (54.02%), Postives = 49/87 (56.32%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE           ATR VLSEYGNMSSACVLFILDEMRK S  +   T                    +TVVLHSVP
Sbjct:  302 HPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNDGLGT-TGEGLEWGVLFGFGPGLTIETVVLHSVP 387

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHSY_DIAMO (Chalcone synthase OS=Dianthus monspessulanus GN=CHS PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.654e-60
Identity = 124/227 (54.63%), Postives = 153/227 (67.40%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            +RFM+YQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITA+ FRGP +  LDS+VGQALF            PD S+ERPL+Q+    QT+LPDS+GAIDGHLREVGLTFHLLKDVPG+ISKNI  +L EAF+P+G+SDWN++FWIA P             G  + E    T +V     ++   C++    + ++      +    +GL     FGFGPGLTV+
Sbjct:  155 RRFMLYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAICFRGPTEAALDSMVGQALFGDGAGALIVGSDPDLSIERPLFQMAWAGQTLLPDSEGAIDGHLREVGLTFHLLKDVPGIISKNITNALEEAFSPIGVSDWNNLFWIAHPGGPAILDQVEAKLG-LKEEKLAATRNVLSDFGNMSSACVLFILDEMRKKSLRDGATTTGEGLDWGVLFGFGPGLTVE 380

HSP 2 Score: 83.1889 bits (204), Expect = 1.512e-15
Identity = 47/87 (54.02%), Postives = 53/87 (60.92%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE+          ATR VLS++GNMSSACVLFILDEMRKKS+ +  AT                    +TVVLHSVP
Sbjct:  303 HPGGPAILDQVEAKLGLKEEKLAATRNVLSDFGNMSSACVLFILDEMRKKSLRDG-ATTTGEGLDWGVLFGFGPGLTVETVVLHSVP 388

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS1_IPOBA (Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF1 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.722e-60
Identity = 129/234 (55.13%), Postives = 155/234 (66.24%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPS-------GV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            KR MMYQQGCFAGGTVLRLAKDLAENNKGARVL+VCSEIT VTFRGP++THLDSLVGQALF            P T  E+PL+QLVS +QT+ P+S GAIDGHLREVGLTFHLLKDVP ++S  IEK L EAF PLGISDWNS+FWIA P      GP+        +   P++  A  H  S      ++   C++    + ++    +      +GL     FGFGPGLT++
Sbjct:  155 KRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQALFGDGAAAVIVGADP-TPAEKPLFQLVSAAQTLAPNSCGAIDGHLREVGLTFHLLKDVPSVVSNKIEKCLFEAFNPLGISDWNSVFWIAHP-----GGPAILDQVEDKLGLKPEKLRATRHVLS---EYGNMSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIE 379

HSP 2 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 47/87 (54.02%), Postives = 48/87 (55.17%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE           ATR VLSEYGNMSSACVLFILDEMRK S      T                    +TVVLHSVP
Sbjct:  302 HPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNAGLGT-TGEGLEWGVLFGFGPGLTIETVVLHSVP 387

The following BLAST results are available for this feature:

BLAST of CF417078 vs. ExPASy Swiss-Prot

BLAST of CF417078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146


Match Name	E-value	Identity	Description
CHS2_IPOBA	4.095e-61	55.98	Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF...	[more]
CHSD_IPONI	1.191e-60	56.41	Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV...	[more]
CHS8_IPOBA	1.556e-60	55.56	Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DI...	[more]
CHS6_PEA	1.556e-60	54.98	Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 ...	[more]
CHS6_IPOBA	1.556e-60	55.56	Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI...	[more]
CHS4_IPOBA	1.556e-60	55.56	Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF...	[more]
CHS3_MEDSA	1.556e-60	54.98	Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1...	[more]
CHS3_IPOBA	2.032e-60	55.56	Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF...	[more]
CHSY_DIAMO	2.654e-60	54.63	Chalcone synthase OS=Dianthus monspessulanus GN=CH...	[more]
CHS1_IPOBA	7.722e-60	55.13	Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF...	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_115000-008 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_A11 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417078 ID=CF417078; Name=CF417078; organism=Citrus sinensis; type=EST; length=708bp
AAGCGCTTCATGATGTACCAACAAGGATGTTTCGCCGGCGGCACTGTTCT
TCGCCTCGCTAAAGACTTGGCTGAGAACAACAAGGGCGCTCGCGTTCTTG
TTGTCTGTTCGGAGATCACGGCAGTCACTTTCCGCGGCCCTGCCGATACT
CATCTTGATTCTCTTGTGGGCCAGGCTTTGTTCGGTGATGGTGCTGCTGC
TGTGATCGTGGGTGCCGATCCTGACACGTCGGTCGAGCGTCCGTTGTATC
AGCTCGTGTCGACTTCGCAGACGATCCTCCCTGACTCTGACGGTGCAATT
GACGGACACTTGCGCGAAGTCGGTCTCACTTTCCATTTGCTTAAAGACGT
CCCCGGCTTGATCTCAAAGAATATAGAGAAAAGCCTGTCTGAAGCGTTCG
CCCCGCTTGGCATCAGCGACTGGAACTCGATATTCTGGATCGCTCCACCC
CGGTGGGCCCGCAATTCTGGACCAAGTGGAGTCTAAACTGGGCCTCAAAG
GGGAGAAGCTGAAGGCCACACGTCAAGTGTTGAGTGAGTACGGTAACATG
TCAAGCGCTTGTGTCTTGTTCATCCTTGACGAGATGAGAAAGAAGTCTGT
TGAGGAAGCGAAAGCCACCCACCGGCGAAGGGCTTGNNTGGGGTGTGCTG
NTTCGGGTTCGGGCCGGGGCTCACCGTCCAAGACCGTTGTGCTGCACAGT
GTCCCCAT