CF417078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHSG_PETHY (Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=2 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 9.164e-45 Identity = 108/232 (46.55%), Postives = 139/232 (59.91%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPA--DT-HLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TG--PQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681 KR MMYQQGC+ GGT LRLAKDLAENNKGARVLVVC EIT ++F+ P+ DT LD LVGQALF P ++E+PL++LV +QT++PDS I +L E GL HLLKD P +IS+NIE+ L E F PLGISDWNSIFW+A P + G P++ A H S ++ C++ + ++ +GL FGFGPGLT++ Sbjct: 155 KRSMMYQQGCYGGGTALRLAKDLAENNKGARVLVVCVEITVMSFQAPSRNDTDELDVLVGQALFADGASAVIIGSDPILAIEKPLFELVFATQTLIPDSGHVICANLTEAGLIPHLLKDAPIVISQNIERRLVEVFKPLGISDWNSIFWVAHPGGPAILNQIELKLGLKPEKLRAARHVLS---EYGNMSSACVLFVLDEMRKGTIEKGMGTTGEGLEWGLLFGFGPGLTIE 383 HSP 2 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 42/86 (48.84%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSV 703 HPGGPAIL+Q+E A R VLSEYGNMSSACVLF+LDEMRK ++E+ T +TVVLHSV Sbjct: 306 HPGGPAILNQIELKLGLKPEKLRAARHVLSEYGNMSSACVLFVLDEMRKGTIEKGMGT-TGEGLEWGLLFGFGPGLTIETVVLHSV 390
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: BBS_PHASS (Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.940e-44 Identity = 109/231 (47.19%), Postives = 135/231 (58.44%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPP--RWARNSGPSGV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESH-PPAKGLXGVCXFGFGPGLTVQ 681 +R M+YQQGCFAGGT LRLAK LAE+ KGARVLVVC+E T V FR P++ H D LV QALF PD + ER + +VSTSQ +LPDS GAI GH+ E GL L +DVP ++SKN+ K L EAF P GISDWNSIFW+ P R + V P++ H + ++ +C VH DE +E +GL FGFGPGLTV+ Sbjct: 155 ERVMLYQQGCFAGGTTLRLAKCLAESRKGARVLVVCAETTTVLFRAPSEEHQDDLVTQALFADGASAVIVGADPDEAADERASFVIVSTSQVLLPDSAGAIGGHVSEGGLLATLHRDVPQIVSKNVGKCLEEAFTPFGISDWNSIFWVPHPGGRAILDQVEERVGLKPEKLSVSRHVLA---EYGNMSSVC-VHFALDEMRKRSANEGKATTGEGLEWGVLFGFGPGLTVE 381 HSP 2 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 42/87 (48.28%), Postives = 46/87 (52.87%), Query Frame = 2 Query: 446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706 HPGG AILDQVE +R VL+EYGNMSS CV F LDEMRK+S E KAT +TVVL SVP Sbjct: 304 HPGGRAILDQVEERVGLKPEKLSVSRHVLAEYGNMSSVCVHFALDEMRKRSANEGKAT-TGEGLEWGVLFGFGPGLTVETVVLRSVP 389
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPU (Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE=3 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 3.259e-42 Identity = 101/231 (43.72%), Postives = 133/231 (57.58%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQRG---EAEGHTSSVE*VR*H--VKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTV 678 KR MMYQQGC AG +LRLAKDLAENNKG RVLVVCSE+ FRGP+ D+L+ Q LF P +E PL++LVS +QT +PD+D + LRE+GLTFH K VP LI++N+E L +AF P GISDWNSIFWI P G + + G + E E +S + + + + C++ + ++ E +GL FGFGPGLT+ Sbjct: 161 KRLMMYQQGCNAGAAMLRLAKDLAENNKGGRVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGAAAVIVGTEPRPGLETPLFELVSAAQTTIPDTDSYLKLQLREMGLTFHCSKAVPSLITQNVEDCLVKAFEPFGISDWNSIFWILHP------GGNAILDGVEEKLGLEPEKLRASRDVLSQYGNLTSACVLFILDEVRKKSKKDEQMTTGEGLEWGVVFGFGPGLTI 385
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHSB_IPOPU (Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.261e-42 Identity = 98/228 (42.98%), Postives = 134/228 (58.77%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPP--RWARNSGPSGV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTV 678 KR MMYQQGC AG +LRLAKDLAE+NKG RVLVVC+EIT FRGP+ D+L+ Q LF P +E PL++LVS++QTI+P++D + HLRE+GLTFH K VP ++++N+E L +AF P GISDWNSIFW+ P + + GP++ A S ++ C++ + ++ E +GL FGFGPGLT+ Sbjct: 161 KRLMMYQQGCNAGAAMLRLAKDLAESNKGGRVLVVCAEITINIFRGPSLEQDDNLLAQCLFGDGAAAMIVAADPRPGLETPLFELVSSAQTIVPNTDSHLKLHLREMGLTFHCSKAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRVEERLGLGPEKLRASRDVLS---EYGNLTSACVLFILDEMRKKSKKDEQMTTGEGLEWGVVFGFGPGLTI 385
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHSY_FRAAN (Chalcone synthase RJ5 (Fragment) OS=Fragaria ananassa PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 44/86 (51.16%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSV 703 HPGGPAILDQVE+ ATR +LSEYGNMSSACVLFILDE+R+KS T +TVVLHSV Sbjct: 13 HPGGPAILDQVEAKLALKPEKLEATRHILSEYGNMSSACVLFILDEVRRKSAANGHKT-TGEGLEWGVLFGFGPGLTVETVVLHSV 97
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1) HSP 1 Score: 48.9062 bits (115), Expect = 1.700e-11 Identity = 34/126 (26.98%), Postives = 58/126 (46.03%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIE 378 +R + GC AG + LR A LA+ + R+LVVC+E+ ++ F D +V ++F P E PLY+++ + P+++ A+ L + G L +P +I IE Sbjct: 2921 ERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGG--DQMVASSIFADGSAAYIIGCNPRIE-ETPLYEVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIE 3043 HSP 2 Score: 40.4318 bits (93), Expect = 1.700e-11 Identity = 20/50 (40.00%), Postives = 27/50 (54.00%), Query Frame = 2 Query: 443 LHPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRK 592 +H GG +IL +E+ T V YGNMSSA V+F++D RK Sbjct: 3070 IHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARK 3119 The following BLAST results are available for this feature:
BLAST of CF417078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417078 ID=CF417078; Name=CF417078; organism=Citrus sinensis; type=EST; length=708bpback to top |