CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18 Identity = 42/110 (38.18%), Postives = 68/110 (61.82%), Query Frame = 1 Query: 28 FPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNV-DIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEE 354 F E +I KGT G T +EG ++ + + P +YPFKPPK++F+T +HPN+ + G ICLDIL++ WS +++ L+S+Q+LL P + P +++ AQ + E Sbjct: 26 FVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRE 135
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.448e-17 Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEY 357 GI FP E+++ + TI+G + T + G +R+ L D+P PPK F T FHPNV G IC+++L+ W++ +R +LL+I+ LL PN S LN +A + L N EEY Sbjct: 30 GIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.448e-17 Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEY 357 GI FP E+++ + TI+G + T + G +R+ L D+P PPK F T FHPNV G IC+++L+ W++ +R +LL+I+ LL PN S LN +A + L N EEY Sbjct: 30 GIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_BRAFL (Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma floridae GN=BRAFLDRAFT_259979 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17 Identity = 47/130 (36.15%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL----WSNQEEYRKMVEKLYKPPS 393 G+ FP E +I + TI+G T +EG ++++ LS D+P PPK F T FHPNV G IC++ L+ W + ++ ILL+I+ LL PN S LN +A +L + N E +M+ +++ P+ Sbjct: 32 GVKVFPNEQDITDVQATIEGPGGTPYEGGQFKIKLSLGKDFPQTPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKADLGLKHILLTIKCLLIYPNPESALNEEAGKLLLEQYDNYSERARMMTEIHAKPT 161
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_RAT (Ubiquitin-conjugating enzyme E2 S OS=Rattus norvegicus GN=Ube2s PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEY 357 GI FP E+++ + TI+G + T + G +R+ L D+P PPK F T FHPNV G IC+++L+ W++ +R +LL+I+ LL PN S LN +A + L N EEY Sbjct: 30 GIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEY 357 GI FP E+++ + TI+G + T + G +R+ L D+P PPK F T FHPNV G IC+++L+ W++ +R +LL+I+ LL PN S LN +A + L N EEY Sbjct: 30 GIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 1 Query: 16 GISAFPEED-----NIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQD--KWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMV 369 G+ A P ++ N+ + I G K T +EG ++L + F +DYP PPK KFE FHPNV G +CL IL++ W A ++ ILL IQ LL EPNI P ++A ++ ++ EY K V Sbjct: 23 GLVAVPTKNPDGTMNLMNGECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIFCQDRTEYEKRV 148
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 41/116 (35.34%), Postives = 73/116 (62.93%), Query Frame = 1 Query: 28 FPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAA-QLWSNQEEYRKMVE 372 FP ++I ++ T++ + ++G E+R S ++P +PPKVK +HPN+D+ GN+CL+IL++ W + +++ +Q L EPN S PLN AA Q+ +N+EE+++ V+ Sbjct: 46 FPSAEDIMNFELTVRPDEG-FYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFKRNVK 160
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEY 357 GI FP E+++ + TI+G + T + G +R+ L D+P PPK F T FHPNV G IC+++L+ W++ +R +LL+I+ LL PN S LN +A + L N EEY Sbjct: 30 GIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 37 EDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQD--------KWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEK 375 E+N+ W ++G DT +EG ++ ++FP +YP++PPK+ F + +HPN+ G +C+ IL WS A + T+LLS+ SL EPN SP N AA + YRK++ K Sbjct: 27 ENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAA------KSYRKLMHK 141 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |