CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC12_ASHGO (NEDD8-conjugating enzyme UBC12 OS=Ashbya gossypii GN=UBC12 PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.037e-15 Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 79 KDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAA 330 ++ V+ G +R S+ F + YP +PP VK +HPN+D GNICL++L++ WS D++T++L + L EPN S PLN QAA Sbjct: 68 EEGVYRGGHFRFSVVFRDTYPIEPPTVKCLNTIYHPNIDYSGNICLNVLREDWSPVMDLQTVVLGLLFLFLEPNGSDPLNRQAA 151
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.355e-15 Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 43 NIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVD-IYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL 336 ++F WK I+G +T +EG ++ L + YP PP V F+T HPN+ G +C+DIL+ WS A+ +++ L+I SLL + SSPLN AA+L Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKL 131
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2H_MOUSE (Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.770e-15 Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 73 GSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVD-IYGNICLDILQDKWSSAYDVRTILLS-IQSLLGEPNISSPLNSQAAQLWSNQ-EEYRKMVEKLYKPPSA*F*EDLKELEEGCEKGIDTRSFSFF 471 G + T +EG +++ + P+ YPFK P + F FHPN+D G +CLD++ W++ YD+ I S + LL PN PLN AA ++ ++ EEY++ +++ + + E LKE EEG S S F Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT--EEALKEQEEGTGDSSSESSMSDF 173
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2H_HUMAN (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.770e-15 Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 73 GSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVD-IYGNICLDILQDKWSSAYDVRTILLS-IQSLLGEPNISSPLNSQAAQLWSNQ-EEYRKMVEKLYKPPSA*F*EDLKELEEGCEKGIDTRSFSFF 471 G + T +EG +++ + P+ YPFK P + F FHPN+D G +CLD++ W++ YD+ I S + LL PN PLN AA ++ ++ EEY++ +++ + + E LKE EEG S S F Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT--EEALKEQEEGTGDSSSESSMSDF 173
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.770e-15 Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 73 GSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVD-IYGNICLDILQDKWSSAYDVRTILLS-IQSLLGEPNISSPLNSQAAQLWSNQ-EEYRKMVEKLYKPPSA*F*EDLKELEEGCEKGIDTRSFSFF 471 G + T +EG +++ + P+ YPFK P + F FHPN+D G +CLD++ W++ YD+ I S + LL PN PLN AA ++ ++ EEY++ +++ + + E LKE EEG S S F Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT--EEALKEQEEGTGDSSSESSMSDF 173
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.311e-15 Identity = 38/104 (36.54%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDIL----QDKWSSAYDVRTILLSIQSLLGEPNISSPL 315 GI+ + ++D + + I G +T +E ++L + P YPF+PP+++F T +HPN+D G ICLD+L + W + ++ T+L SIQ L+ EPN PL Sbjct: 21 GITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPL 124
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.311e-15 Identity = 36/82 (43.90%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 91 FEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL 336 ++G ++R + +F YP PPKV FHPN+D +G ICL+IL++ WS A D++ I+L + SL EPN + PLN +AA++ Sbjct: 76 YKGGKFRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEV 157
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBCX_PICAN (Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta GN=PEX4 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.942e-15 Identity = 49/133 (36.84%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 10 DSGI-SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKF-------------------ETGCF---HPNVDI-YGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL 336 D+GI P ED +F W I+G + FE ++L + P +YP PPK+KF C+ HPNV+ G ICLDILQ KWS A+ +++ L++I LL P SPLN A L Sbjct: 28 DTGIVDLHPLEDGLFRWSAVIRGPDQSPFEDALWKLEIDIPTNYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICLDILQQKWSPAWTLQSALVAIVVLLANPEPLSPLNIDMANL 160
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.942e-15 Identity = 31/85 (36.47%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 82 DTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL 336 D +++ ++ +++ P+ YP+ PPKV +T +HPN+D+ G++CL+IL+ W ++ T++ + +L EPN PLN AAQL Sbjct: 116 DGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQL 200
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2SC_XENLA (Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus laevis GN=ube2s-C PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.942e-15 Identity = 44/115 (38.26%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEY 357 GI P E++I + I+G + T + +R+ L D+P PPK F T FHPNV G IC+++L+ W + +R +LL+I+ LL PN S LN +A + L N EEY Sbjct: 30 GIKIIPNEEDITDVQVHIEGPEGTPYAAGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |