CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW 339 SA P +++F W+ TI G ++ + G + +++ FP DYPFKPPKV F T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ Sbjct: 22 SAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 127
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 55/122 (45.08%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPL-NSQAAQLWSNQEEYRKMVEKLYK 384 SA P+ DNI+ W+ TI G +V+EG + L ++F +DYPFKPPKV F T +H N++ G ICLDIL+D WS A + +LLSI SLL + N + PL S A Q +N+ E+ ++ + K Sbjct: 82 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTK 203
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 55/122 (45.08%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPL-NSQAAQLWSNQEEYRKMVEKLYK 384 SA P+ DNI+ W+ TI G +V+EG + L ++F +DYPFKPPKV F T +H N++ G ICLDIL+D WS A + +LLSI SLL + N + PL S A Q +N+ E+ ++ + K Sbjct: 82 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTK 203
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 55/122 (45.08%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPL-NSQAAQLWSNQEEYRKMVEKLYK 384 SA P+ DNI+ W+ TI G +V+EG + L ++F +DYPFKPPKV F T +H N++ G ICLDIL+D WS A + +LLSI SLL + N + PL S A Q +N+ E+ ++ + K Sbjct: 82 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTK 203
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 55/122 (45.08%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPL-NSQAAQLWSNQEEYRKMVEKLYK 384 SA P+ DNI+ W+ TI G +V+EG + L ++F +YPFKPPKV F T +H N++ G ICLDIL+D WS A + +LLSI SLL + N + PL S A Q +N+ E+ +M + K Sbjct: 68 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTK 189
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 55/122 (45.08%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPL-NSQAAQLWSNQEEYRKMVEKLYK 384 SA P+ DNI+ W+ TI G +V+EG + L ++F +YPFKPPKV F T +H N++ G ICLDIL+D WS A + +LLSI SLL + N + PL S A Q +N+ E+ +M + K Sbjct: 68 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTK 189
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 4.349e-22 Identity = 58/140 (41.43%), Postives = 77/140 (55.00%), Query Frame = 1 Query: 4 SGDSGISAFPE-EDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDIL-------------QDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 378 +G GI+A P ED+ F W IQG T FEG Y +L FP+DYP PP +KFE FHPNV G +C+ IL ++WS V ILLS+ S+L EPN S N A ++W ++EEY ++V +L Sbjct: 20 NGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRL 159
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.679e-22 Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEE 354 S SA P D+++ W+ +I G D+ + G + LS+ FP DYP KPPK+ T +HPN++ GNICLDIL+D+WS A + +LLSI SLL + N PL + A ++ + Sbjct: 19 SSCSAGPVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRK 132
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.819e-21 Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 43 NIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDK--WSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEK 375 N+F W+ I G KDT++EG YR+ + F +D+P PPK KFE FHPNV G +CL +L + W + ++ +L+ IQ LL PNI P ++A Q++ N+ EY K V+K Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.681e-21 Identity = 53/116 (45.69%), Postives = 73/116 (62.93%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPL-NSQAAQLWSNQEEYRKM 366 SA P+ DN++ W TI G +V+EG + L + F +YPFKPPKV F T +H N++ G ICLDIL+D WS A + +LLSI SLL + N + PL S A Q N+EE+ ++ Sbjct: 107 SAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRI 222 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |