CF417107
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417107 vs. ExPASy Swiss-Prot
Match: RL7_HELPG (50S ribosomal protein L7/L12 OS=Helicobacter pylori (strain G27) GN=rplL PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12 Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 3 Query: 135 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADNIVAKLKEVGAQVSME 338 F++ L GAE K+KVIK VR TGLGLKE+K+ EK P +LK GV K+EA+ I KL+EVGA+V ++ Sbjct: 59 FNVILADSGAE-KIKVIKVVREITGLGLKEAKDATEKTPHVLKEGVNKEEAETIKKKLEEVGAKVEVK 125
BLAST of CF417107 vs. ExPASy Swiss-Prot
Match: RL7_HELP2 (50S ribosomal protein L7/L12 OS=Helicobacter pylori (strain P12) GN=rplL PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12 Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 3 Query: 135 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADNIVAKLKEVGAQVSME 338 F++ L GAE K+KVIK VR TGLGLKE+K+ EK P +LK GV K+EA+ I KL+EVGA+V ++ Sbjct: 59 FNVILADSGAE-KIKVIKVVREITGLGLKEAKDATEKTPHVLKEGVNKEEAETIKKKLEEVGAKVEVK 125
BLAST of CF417107 vs. ExPASy Swiss-Prot
Match: RL7_HELAH (50S ribosomal protein L7/L12 OS=Helicobacter acinonychis (strain Sheeba) GN=rplL PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12 Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 3 Query: 135 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADNIVAKLKEVGAQVSME 338 F++ L GAE K+KVIK VR TGLGLKE+K+ EK P +LK GV K+EA+ I KL+EVGA+V ++ Sbjct: 59 FNVILADSGAE-KIKVIKVVREITGLGLKEAKDATEKTPHVLKEGVNKEEAETIKKKLEEVGAKVEIK 125
BLAST of CF417107 vs. ExPASy Swiss-Prot
Match: RL7_GEOTN (50S ribosomal protein L7/L12 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplL PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12 Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = 3 Query: 135 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADNIVAKLKEVGAQVSME 338 FD+ L GA+ K+KVIK VR TGLGLKE+K+LV+ P LK V+K+EA+ I AKL+EVGA+V ++ Sbjct: 57 FDVILADAGAQ-KIKVIKVVREITGLGLKEAKDLVDNTPKPLKEAVSKEEAEEIKAKLEEVGAKVEVK 123
BLAST of CF417107 vs. ExPASy Swiss-Prot
Match: RL7_THEM4 (50S ribosomal protein L7/L12 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rplL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11 Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 3 Query: 135 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPT---LLKRGVTKDEADNIVAKLKEVGAQVSME 338 FD+ L+ +GA+ K+ VIK VR TGLGLKE+K+LVEK T ++K+GV KDEA+ I KL+E GA+V ++ Sbjct: 60 FDVVLKSFGAK-KINVIKVVREITGLGLKEAKDLVEKAGTPDAVIKQGVNKDEAEEIKKKLEEAGAEVELK 129
BLAST of CF417107 vs. ExPASy Swiss-Prot
Match: RL7_RHOPB (50S ribosomal protein L7/L12 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11 Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 3 Query: 165 EAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADNIVAKLKEVGAQVSME 338 E K++VIKEVR TGLGLKE+K+LVE P +K GV KDEAD I A+L++ GA+V ++ Sbjct: 66 EKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKDEADKIKAQLEKAGAKVELK 123
BLAST of CF417107 vs. ExPASy Swiss-Prot
Match: RL7_PROMH (50S ribosomal protein L7/L12 OS=Proteus mirabilis (strain HI4320) GN=rplL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11 Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = 3 Query: 135 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADNIVAKLKEVGAQVSME 338 FD+ L+G G K+ VIK VRG TGLGLKE+K+LVE P LK GV+KD+A+ + L+E GA+V ++ Sbjct: 55 FDVILKGIGGN-KVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK 121
BLAST of CF417107 vs. ExPASy Swiss-Prot
Match: RL7_CLOPS (50S ribosomal protein L7/L12 OS=Clostridium perfringens (strain SM101 / Type A) GN=rplL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11 Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 3 Query: 135 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADNIVAKLKEVGAQVSME 338 FD+ L GA K+KVIK VR TGLGLKE+KE+V+ P LK V K+EA+++ AKL EVGA+V ++ Sbjct: 55 FDVVLTNAGAN-KIKVIKAVRELTGLGLKEAKEIVDGAPKTLKEAVAKEEAEDMKAKLAEVGAEVELK 121
BLAST of CF417107 vs. ExPASy Swiss-Prot
Match: RL7_CLOPE (50S ribosomal protein L7/L12 OS=Clostridium perfringens GN=rplL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11 Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 3 Query: 135 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADNIVAKLKEVGAQVSME 338 FD+ L GA K+KVIK VR TGLGLKE+KE+V+ P LK V K+EA+++ AKL EVGA+V ++ Sbjct: 55 FDVVLTNAGAN-KIKVIKAVRELTGLGLKEAKEIVDGAPKTLKEAVAKEEAEDMKAKLAEVGAEVELK 121
BLAST of CF417107 vs. ExPASy Swiss-Prot
Match: RL7_CLOP1 (50S ribosomal protein L7/L12 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rplL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11 Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 3 Query: 135 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADNIVAKLKEVGAQVSME 338 FD+ L GA K+KVIK VR TGLGLKE+KE+V+ P LK V K+EA+++ AKL EVGA+V ++ Sbjct: 55 FDVVLTNAGAN-KIKVIKAVRELTGLGLKEAKEIVDGAPKTLKEAVAKEEAEDMKAKLAEVGAEVELK 121 The following BLAST results are available for this feature:
BLAST of CF417107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417107 ID=CF417107; Name=CF417107; organism=Citrus sinensis; type=EST; length=607bpback to top |