CF417117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_DICDI (Eukaryotic translation initiation factor 2 subunit 1 OS=Dictyostelium discoideum GN=eif2s1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.051e-36 Identity = 90/225 (40.00%), Postives = 129/225 (57.33%), Query Frame = 3 Query: 3 VMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLG-----IDLEELYVNIGWPLYWKYGHAFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMR----------KAEAAGNND----CPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 V+V+RVDK+KGYIDLSKRRV+ E+ CEER++KSK VH I+R+VA L + + LY WPLY KYGHA+EAFK+ +T+P SV N + E + L++ I +++ PQP K+RAD+E+ C+ ++G+ IK A+ KA G D V IKLVAPPLYV+ +KE+G+S++ + + +E I K Sbjct: 72 VVVVRVDKDKGYIDLSKRRVTPEEYAQCEERFHKSKAVHGIVRYVATKLSTEDNVVKTKHLYTKFVWPLYTKYGHAYEAFKLSITEP-SVFNGFD-------------------IAENERKVLMETIIQKLKPQPHKVRADLEITCYDYEGIDAIKHAITASQNHALSVLKAPEDGKFDEKAFGVVTIKLVAPPLYVMVGTFDEKEKGLSMVGQCVDVLSEEITK 276
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_DROME (Eukaryotic translation initiation factor 2 subunit 1 OS=Drosophila melanogaster GN=eIF-2alpha PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 7.794e-36 Identity = 82/204 (40.20%), Postives = 120/204 (58.82%), Query Frame = 3 Query: 3 VMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGID----LEELYVNIGWPLYWKYGH---AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAI 593 V+V+RVDKEKGYIDLSKRRVS ED++ C ER+ K+K ++S++RHVA+ LG + LE+LY W KY + A++ FK VTDP +V + E E K+ L+ NI+R++ +KIRAD+E C+ ++G+ +K ++ K + P++I L+APPLYV+TT T K G+ L AI Sbjct: 70 VVVIRVDKEKGYIDLSKRRVSPEDVEKCTERFAKAKAINSLLRHVADILGFEGNEKLEDLYQKTAWHFEKKYNNKTVAYDIFKQSVTDP-TVFDECNLE-------------------PETKEVLLSNIKRKLVSPTVKIRADIECSCYGYEGIDAVKASLTKGLELSTEELPIRINLIAPPLYVMTTSTTKKTDGLKALEVAI 253
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_METJA (Translation initiation factor 2 subunit alpha OS=Methanocaldococcus jannaschii GN=eif2a PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.860e-16 Identity = 57/205 (27.80%), Postives = 97/205 (47.32%), Query Frame = 3 Query: 9 VLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKA-EAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 VLRVD+ KG+IDLS +RV+E+ +A + + + + ++ AE LG LEE + +G+ L ++G + AF+ +V + VL+ L ++EE K+ L + + + +++ +EMK + DG+ IK A+ A +A D VKI + P Y + D + G V K I+K Sbjct: 68 VLRVDERKGHIDLSLKRVTEQQKRAKVQEWKRFQRASKMLERAAEKLGKSLEEAWEEVGYLLEDEFGELYNAFETMVIEGKEVLDDL-------------------EISEEWKNVLYEVAKESIELTNVEVEGVIEMKSYAPDGIKQIKKALTTALKANPYEDVEVKITYIGAPKYRVVVIAPDYKSGEEVFKKVCEKAVATIKK 253
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_METS3 (Translation initiation factor 2 subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=eIF2A PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.162e-13 Identity = 53/203 (26.11%), Postives = 94/203 (46.31%), Query Frame = 3 Query: 9 VLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIE 617 VLRV+ +KG++D S +R+ E+ + + + + A++LG L + Y +G+ L +G + AF+ T D SLT E +++E DA+ + + +TP + I V+++ F DGV I +A++ AE G+ + +K++ V P Y +T + D L A C E +E Sbjct: 68 VLRVNPKKGHVDASLKRIREDQRTKKIQHWKIEQKAEKFLELSAKSLGKSLNDAYDEVGYELMDIFGDVYGAFE---TAADDGAKSLTDE----------------GISQEWADAITEIANKNITPPEVHISGYVDIETFVPDGVDVIIEALKAAEDNGDEEEEIKVQCVGAPRYRITVKSTDYILAEKALKAAADRCIEIVE 251
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_METKA (Translation initiation factor 2 subunit alpha OS=Methanopyrus kandleri GN=eif2a PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.099e-13 Identity = 52/204 (25.49%), Postives = 95/204 (46.57%), Query Frame = 3 Query: 9 VLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 V+RV+ ++ Y +LS R+V++ + + + + + ++ AE LG DL+E Y G+ L +YG ++A L R E GP+ V E++ + ++NI P +KI A V++ C +GV I++A+ K E D ++++ V P Y +T D ++ KA A + +E+ Sbjct: 68 VIRVNPKRKYANLSLRKVTDHQRKEKLKEWKREQRAEKLLEMAAEELGKDLDEAYEEAGYKLIEEYGSLYDA--------------LERAAAEEGPEPLLKAGVPEEWAEKLAELAIENIE----PGRVKIEAYVDLTCPAPNGVEIIREALEKIEEFQQGDVKMEVQYVGAPRYRITVDAPDYRTAEKMVRKAAQAAIDHVEE 253
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_ARCFU (Translation initiation factor 2 subunit alpha OS=Archaeoglobus fulgidus GN=eif2a PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.895e-11 Identity = 56/204 (27.45%), Postives = 93/204 (45.59%), Query Frame = 3 Query: 9 VLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 VL V+ ++G+IDLS + V+E + +++ + + E L ID +EL IG L +Y + AF+ E +G EV + P V EE + + R + P+ +K+R E+K DG+ IK A+ +A+ A N +K++ V P Y + D + +VL KA +AI+K Sbjct: 73 VLDVNPKRGHIDLSIKDVNERQRREKLQQWKNEMKAFKWLEIIGEKLNIDFKELE-KIGKKLMKEYDSVYSAFE------------------EAAFEGYEV--LAPIVGEEFAKEMAEIARENIKPKRVKVRGYFELKSSASDGIERIKKALLEAKKALVNGVEMKLEYVGAPKYRIVVEADDYKTAENVLKKATENVLKAIKK 255 The following BLAST results are available for this feature:
BLAST of CF417117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417117 ID=CF417117; Name=CF417117; organism=Citrus sinensis; type=EST; length=622bpback to top |