CF417122
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: PPM1L_MOUSE (Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11 Identity = 50/157 (31.85%), Postives = 76/157 (48.41%), Query Frame = 2 Query: 203 GPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKEN---AMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVS-STCGTTALTALVLGRNLLVANAGDCRAVLCXK-GVAVDMSQDHRPSYLPERRRVE 658 G R M+D + DL+ T + + +FDGHGG AA YVK A+K +D + + + + + ++ + +VS GTT L AL+ ++L VAN GD R VLC K G A+ +S DH+P L ER+R++ Sbjct: 100 GRRDHMEDRFEVLTDLANK--------THPSIFGIFDGHGGETAAEYVKSRLPEALKQHLQDYEKDKENSV-----LTYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIK 243
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: PPM1L_BOVIN (Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11 Identity = 44/130 (33.85%), Postives = 67/130 (51.54%), Query Frame = 2 Query: 284 TPSAFYAVFDGHGGPEAAVYVKEN---AMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVS-STCGTTALTALVLGRNLLVANAGDCRAVLCXK-GVAVDMSQDHRPSYLPERRRVE 658 T + + +FDGHGG AA YVK A+K +D + + + + + ++ + +VS GTT L AL+ ++L VAN GD R VLC K G A+ +S DH+P L ER+R++ Sbjct: 119 THPSIFGIFDGHGGETAAEYVKSRLPEALKQHLQDYEKDKENSV-----LSYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIK 243
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: PP2C6_PARTE (Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11 Identity = 44/138 (31.88%), Postives = 67/138 (48.55%), Query Frame = 2 Query: 254 AHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTS---DINDVFLAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658 AH+ L P F AVFDGHGG E A++ + + + K+ + Q + + + F + + +S G TA AL++G+ L VANAGD R+ L G DMS+DH+P E++R+E Sbjct: 39 AHISDLNIEPDVHLF-AVFDGHGGSEVAIFAERHFREELMKNKNYQQKNYEKALTETFFKIDKMLQEPSGLDELNKIRGVTDEASLAGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDEQEKKRIE 175
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: PP2C5_PARTE (Probable protein phosphatase 2C 5 OS=Paramecium tetraurelia GN=GSPATT00010582001 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11 Identity = 45/155 (29.03%), Postives = 73/155 (47.10%), Query Frame = 2 Query: 203 GPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTS---DINDVFLAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658 G R +M+D HI ++ + +AVFDGHGG E A++ + + + K+ + Q + + + F + + +S G TA AL++G+ L VANAGD R+ L G DMS+DH+P E++R+E Sbjct: 31 GWRNTMEDAHISDMNIEPDVH----------LFAVFDGHGGSEVAIFAERHFREELMKNKNYQQKNYEKALTETFFKIDKMLQEPSGQDELNKIRGVNDETSLAGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDDQEKKRIE 175
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11 Identity = 40/120 (33.33%), Postives = 62/120 (51.67%), Query Frame = 2 Query: 299 YAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658 + +FDGHGG AA ++K++ + K S I D A E K E +++ G+TA TA+ +G ++ VAN GD R V+ G A+ +S DH+P+ ER+R+E Sbjct: 147 FGIFDGHGGSHAAEHLKKHLFENLLK-----HPSFITDTKSAISETYRKTDSDFLDA----ETNINREDGSTASTAIFVGNHIYVANVGDSRTVMSKAGKAIALSSDHKPNRKDERKRIE 257
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C56_ORYSJ (Probable protein phosphatase 2C 56 OS=Oryza sativa subsp. japonica GN=Os06g0526800/Os06g0526950 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11 Identity = 55/157 (35.03%), Postives = 79/157 (50.32%), Query Frame = 2 Query: 203 GPRISMDDEH-IRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVSSTC----GTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658 G R SM+D I++ ++ SLF VFDGHGG AA Y+KE+ LF + P+ + D LA + K SVSS G+TA+TA+++G +L V N GD R V G AV +S+DH+P+ E++R+E Sbjct: 104 GRRPSMEDRFSIKMTTINEQTVSLF---------GVFDGHGGSLAAEYLKEH---LFENLVNHPEL--LRDTKLAISQTFLKTDADFL-------ESVSSNPFRDDGSTAVTAILVGNHLYVGNVGDSRVVALKAGKAVPLSEDHKPNRKDEQKRIE 239
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11 Identity = 39/122 (31.97%), Postives = 62/122 (50.82%), Query Frame = 2 Query: 293 AFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658 +F+ V+DGHGG +AA +V EN K + + + + E + K + VS C +TA++ + ++V+N GDCRAVLC GVA ++ DH+P E+ R+E Sbjct: 150 SFFGVYDGHGGAKAAEFVAENLHKYVVEMMENCKGKE-------EKVEAFKAAFLRTDRDFLEKGVVSGAC---CVTAVIQDQEMIVSNLGDCRAVLCRAGVAEALTDDHKPGRDDEKERIE 261 The following BLAST results are available for this feature:
BLAST of CF417122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417122 ID=CF417122; Name=CF417122; organism=Citrus sinensis; type=EST; length=659bpback to top |