CF417125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_BRUO2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dxs PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.803e-37 Identity = 81/132 (61.36%), Postives = 95/132 (71.97%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 398 GKGRI+ EG +VALL +GT +Q CLAA+ L + GL TV DARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD +K R L LPD Y DHG P A+AGL + I TVF L Sbjct: 496 GKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVVDARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_BRUAB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus GN=dxs PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.355e-37 Identity = 81/132 (61.36%), Postives = 96/132 (72.73%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 398 GKGRI+ EG +VALL +GT +Q CLAA+ L + GL TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGF SHV+QFLA DGLLD +K R L+LPD Y DHG P A+AGL + I TVF L Sbjct: 496 GKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGLKVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_BRUA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain S19) GN=dxs PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.355e-37 Identity = 81/132 (61.36%), Postives = 96/132 (72.73%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 398 GKGRI+ EG +VALL +GT +Q CLAA+ L + GL TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGF SHV+QFLA DGLLD +K R L+LPD Y DHG P A+AGL + I TVF L Sbjct: 496 GKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGLKVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_RHIME (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium meliloti GN=dxs PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.076e-37 Identity = 76/134 (56.72%), Postives = 100/134 (74.63%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 404 GKGRI+ +G +VALL +GT + CL A+ L++ GL TVADARF KPLDH LIR LA+ HEVLIT+EEG++GGF SHV+QFLA +GL+DG +K RP+V+PD +++ P A+AGL + I +TVF LGQ Sbjct: 502 GKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLKVRPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 635
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_BRUA2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain 2308) GN=dxs PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.853e-37 Identity = 80/132 (60.61%), Postives = 95/132 (71.97%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 398 GKGRI+ EG +VALL +GT +Q CLAA+ L + GL TVADARF KPLDH LIR L + HEVL+ VEEG++GGF SHV+QFLA DGLLD +K R L+LPD Y DHG P A+AGL + I TVF L Sbjct: 496 GKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLVREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGLKVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_MESSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp. (strain BNC1) GN=dxs PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.169e-36 Identity = 78/138 (56.52%), Postives = 98/138 (71.01%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 416 GKGRI+ EG ++ALL GT + C+ A+ LE+ GL TVADARF KPLD LIR LA+ HEVL+TVEEGSIGGFG+HV+ FLA +GLL+ +K RPLV+PD ++D P A+AGL + I TVF LGQ +A Sbjct: 510 GKGRIVREGSKIALLSLGTRLADCMIAAEELEAAGLSTTVADARFAKPLDADLIRRLAREHEVLVTVEEGSIGGFGAHVLHFLAHEGLLENGLKVRPLVMPDIFMDQAKPEKMYAKAGLDAAGIVKTVFAALGQAEQA 647
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_RHIL3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dxs PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 7.577e-36 Identity = 77/134 (57.46%), Postives = 97/134 (72.39%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 404 GKGRI+ EG +VALL +GT + CL A+ L++ GL TVADARF KPLDH LIR LA+ HE++ITVEEGSIGGFGSHV+ FLA +GLLD +K R LV+PD +++ P A AGL + I +TVF LG+ Sbjct: 497 GKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEMVITVEEGSIGGFGSHVMHFLATEGLLDNGLKLRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_BRASO (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain ORS278) GN=dxs PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.292e-35 Identity = 72/134 (53.73%), Postives = 97/134 (72.39%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 404 GKGR++ +G++VALL +GT + C A+ L +HGL ++ADARF KPLD L+ LA+ HE+LIT+EEGSIGGFGSHV+Q+LA G+LDG +K R +VLPD + DH +PA A+AGL I VF +LG+ Sbjct: 498 GKGRMIRQGKQVALLSFGTRLAECEKAADELAAHGLSASIADARFMKPLDEELVLKLARDHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEVLGK 631
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_AGRT5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dxs PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.204e-35 Identity = 76/134 (56.72%), Postives = 95/134 (70.90%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 404 GKGRI+ EG +VALL +GT + CLAA+ L++ GL TVADARF KPLD LIR LA HEVL+T+EEGS+GGFG+HV+ F+A GLLD K R L LPD++++ P A AGL + I +TVFN LGQ Sbjct: 497 GKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_RHIE6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CIAT 652) GN=dxs PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.760e-35 Identity = 76/134 (56.72%), Postives = 97/134 (72.39%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 404 GKGRI+ EG +VALL +GT + CL A+ LE+ GL TVADARF KPLDH LIR LA+ HE+LITVEEGS+GGFGS V+Q+L+ +GLLD +K R LV+PD +++ P A AGL + I +TVF LG+ Sbjct: 497 GKGRIVKEGTKVALLSFGTRLADCLLAAEDLEAAGLSTTVADARFAKPLDHDLIRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630 The following BLAST results are available for this feature:
BLAST of CF417125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 386
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417125 ID=CF417125; Name=CF417125; organism=Citrus sinensis; type=EST; length=608bpback to top |