CF417125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_BORPE (1-deoxy-D-xylulose-5-phosphate synthase OS=Bordetella pertussis GN=dxs PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.875e-18 Identity = 57/129 (44.19%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 386 GKG + EG R+A+LG+GT VQ+ L A+ +++ VAD RF KPLD L+ LA H+ L+TVEE +I GG GS V++ LA G+ T+ L LPD +IDHG A LA GL + I + Sbjct: 491 GKGLVRREGRRIAILGFGTLVQAALGAAGQIDA-----MVADMRFVKPLDRELVLELAARHDALVTVEEAAIMGGAGSAVLETLAEAGV---TLPVLQLGLPDAFIDHGDQAALLAGLGLDAAGIERAI 611
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_VIBVY (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio vulnificus (strain YJ016) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18 Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 404 GKGR++ +GE+VA+L +GT + A+AL + L TVAD RF KPLD ALIR LA H+VLIT+EE +I GG G+ V++F+ + ++ + L LPD++I G+ + + GL I + + L + Sbjct: 495 GKGRLVRQGEKVAILSFGTFL-----ANALEAAEALNATVADMRFVKPLDEALIRQLANEHDVLITIEENAIAGGAGAGVIEFMMQEKIMKPVLN---LGLPDKFIHQGTQEELHEELGLDAKGIEQAIRHYLAK 621
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_SYNJB (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18 Identity = 54/129 (41.86%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 386 GK +L G V +L YG+ V L A+ +L+ HG+ TV +ARF KPLD LI LA+ +++TVEEG + GGFGS V + L LD D V L +PD +++H +P + LA+ GL + IA + Sbjct: 502 GKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISATVVNARFAKPLDTELILPLAEQSRLVVTVEEGCLMGGFGSAVAEAL-LDA--DLAVPLLRLGVPDVWVEHATPEESLAELGLNSAGIAERI 627
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_RALEJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Ralstonia eutropha (strain JMP134) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18 Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 3 Query: 27 GERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 386 G+RVA LG+G+ V L A+ L++ +VAD RF KPLD L++ LA+ H L+TVEEGS+ GG GS V++ LA G+ + L LPDR+IDHG PA L+Q GL + I +V Sbjct: 508 GQRVAFLGFGSMVHPALGAAQALDA-----SVADMRFVKPLDVELVKRLAEEHNYLVTVEEGSVMGGAGSAVLEALAEAGI---DIPVLVLGLPDRFIDHGDPALLLSQCGLDAAGIERSV 620
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_PSEPG (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas putida (strain GB-1) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18 Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 386 GKG + +GE++ALL +G + A A+ + + TV D RF KPLD AL+ LA SHE+L+T+EE +I GG G+ V +FLA +L + L LPD Y++H PA LA+ GL + I A+V Sbjct: 502 GKGVVRRQGEKIALLVFGVQL-----AEAMQVAEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVLKPLLH---LGLPDIYVEHAKPAQMLAECGLDAAGIEASV 622
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_CUPTR (1-deoxy-D-xylulose-5-phosphate synthase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18 Identity = 62/134 (46.27%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 3 GKGRILIE-----GERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 386 GKG + E G RV L +G+ VQ L A+ L++ TVAD RF KPLD AL++ LA H+ L+TVEEGS+ GG GS V++ LA G +D V L LPDR++DHG PA L Q GL + I +V Sbjct: 495 GKGVVRREAGARAGHRVGFLAFGSMVQPALGAAEALDA-----TVADMRFVKPLDVALVKRLAADHDYLVTVEEGSVMGGAGSAVLEALAEAG-IDKPV--LTLGLPDRFVDHGDPAFLLQQCGLDAAGIERSV 620
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_BURXL (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia xenovorans (strain LB400) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18 Identity = 58/134 (43.28%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 3 GKGRILIE-----GERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 386 GKG I E G+R+A+L +GT V LAA+ L++ TVA+ RF KPLD L+R LA++H+ ++TVEEG + GG GS V+ L G+ ++ L LPDR+IDHG PA LA GL I ++ Sbjct: 490 GKGEIRRETSQPAGKRIAILAFGTMVAPSLAAAEQLDA-----TVANMRFVKPLDADLVRQLAETHDAIVTVEEGCVMGGAGSACVEALLASGVTRPVLQ---LGLPDRFIDHGDPAKLLAACGLDAVGITKSI 615
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_BORA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bordetella avium (strain 197N) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18 Identity = 57/129 (44.19%), Postives = 79/129 (61.24%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 386 GKG + G R+A++G+GT V + LAA+ L++ TVAD RF KPLD L+R LA +HE L+T+E+ ++ GG GS V + L + GL T+ L LPD +IDHG A LA GL + I +V Sbjct: 491 GKGVVRRRGARIAIMGFGTLVPAALAAAEKLDA-----TVADMRFVKPLDVELLRELAATHEALVTLEDAAVMGGAGSAVTEALNMAGL---TLPVLQLGLPDVFIDHGDQAALLAGVGLDAAGIERSV 611
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_ANAVT (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18 Identity = 55/129 (42.64%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 386 GKG IL G+ V ++GYGT V + A+ +L HG+ TV +ARF KPLD LI LA+ ++T+EEG + GGFGS V + L LD D V + + +PD ++H +P + A+ GLT IA V Sbjct: 497 GKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEAL-LDA--DVVVPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERV 622
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_ANASP (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18 Identity = 55/129 (42.64%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 386 GKG IL G+ V ++GYGT V + A+ +L HG+ TV +ARF KPLD LI LA+ ++T+EEG + GGFGS V + L LD D V + + +PD ++H +P + A+ GLT IA V Sbjct: 497 GKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEAL-LDA--DVVVPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERV 622 The following BLAST results are available for this feature:
BLAST of CF417125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 386
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417125 ID=CF417125; Name=CF417125; organism=Citrus sinensis; type=EST; length=608bpback to top |