CF417125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_ECO27 (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=dxs PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 48/129 (37.21%), Postives = 67/129 (51.94%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 386 GKG + GE++A+L +GT L A + L T+ D RF KPLD ALI +A SHE L+TVEE +I GG GS V + L V + L D +I G+ + A+ GL + + A + Sbjct: 495 GKGIVKRRGEKLAILNFGT-----LMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLLDFFIPQGTQEEMRAELGLDATGMEAKI 615
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_BACTN (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides thetaiotaomicron GN=dxs PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 42/121 (34.71%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESH-GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 359 GKGR L +G+ +A++ G +A A ES G + D RF KPLD L+ + ++ ++T+E+G+I GG GS V++F+A D TVK + +PD+++ HG+ A+ G+ Sbjct: 503 GKGRKLKDGKDIAVISIGPIGNKARSAIARAESESGRSIAHYDLRFLKPLDEELLHEVGRTFRHIVTIEDGTIQGGMGSAVLEFMA-DHEYTPTVK--RIGIPDKFVQHGTVAELYQLCGM 620
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_SALPK (1-deoxy-D-xylulose-5-phosphate synthase OS=Salmonella paratyphi A (strain AKU_12601) GN=dxs PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11 Identity = 46/129 (35.66%), Postives = 66/129 (51.16%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 386 GKG + GE++A+L +GT L A + L T+ D RF KPLD LI +A H+ L+T+EE +I GG GS V + L V + LPD +I G+ + A+ GL + I A + Sbjct: 495 GKGLVKRHGEKLAILNFGT-----LMPEAAKVAEALNATLVDMRFVKPLDDTLILEMAAQHDALVTLEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDLFIPQGTQEEARAELGLDAAGIEAKI 615
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_SALPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Salmonella paratyphi A GN=dxs PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11 Identity = 46/129 (35.66%), Postives = 66/129 (51.16%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 386 GKG + GE++A+L +GT L A + L T+ D RF KPLD LI +A H+ L+T+EE +I GG GS V + L V + LPD +I G+ + A+ GL + I A + Sbjct: 495 GKGLVKRHGEKLAILNFGT-----LMPEAAKVAEALNATLVDMRFVKPLDDTLILEMAAQHDALVTLEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDLFIPQGTQEEARAELGLDAAGIEAKI 615
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_PARD8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=dxs PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11 Identity = 40/126 (31.75%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIA 377 GKG+ L +G+ +A+L G + A +++ + + D + KPLD L+ + + + +ITVE G I GGFGS V++F+A +G T + + +PD +I+HGS + G+ IA Sbjct: 503 GKGKKLRDGDDIAVLSIGPIGNEVIKAIEMVKEERVSIAHYDMIYLKPLDEELLHEIGQKYNRIITVENGVIKGGFGSAVLEFMADNGY---TPHVKRIGVPDAFIEHGSIPELYQLCGMDAESIA 625
BLAST of CF417125 vs. ExPASy Swiss-Prot
Match: DXS_FRAP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=dxs PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11 Identity = 43/137 (31.39%), Postives = 75/137 (54.74%), Query Frame = 3 Query: 3 GKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 410 GK +++ +G RVA+L +GT + A+ L + + +TV D RF KPLD +I + ++H ++ T+EE SI GG GS V +++ + L + R L D ++ HG+ L + L+ + IA + +L + Sbjct: 488 GKAKLVKKGSRVAILNFGTLLP---LANQLADKY--HITVVDMRFVKPLDEQMINQICQNHNIVFTLEESSIAGGAGSAVNEYIFAND-LSKNITVRNFGLKDEFLTHGTKDLLLDYSNLSFNKIAEVLEKLLSHKK 618 The following BLAST results are available for this feature:
BLAST of CF417125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 386
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417125 ID=CF417125; Name=CF417125; organism=Citrus sinensis; type=EST; length=608bpback to top |