CF417141

Overview
NameCF417141
Unique NameCF417141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_SALTI (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella typhi GN=ydcW PE=3 SV=2)

HSP 1 Score: 51.6026 bits (122), Expect = 4.723e-15
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I +   E A LE+ +CGKPL   + D I  +   F ++A  A  L           LE   S + ++PI G+   I PWNYP
Sbjct:   54 EWGQTTPKARAECLLKLADSIEQNALEFARLESQNCGKPLHCVINDEIPAIVDVFRFFAGAARCLSGLAAGEY---LEGHTSMIRRDPI-GVVASIAPWNYP 151

HSP 2 Score: 49.6766 bits (117), Expect = 4.723e-15
Identity = 32/86 (37.21%), Postives = 43/86 (50.00%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   ++KPSE+  +T L+LA   K+     P  L +        G  L  H  V  ++ TGS ATG  I+   AP +K
Sbjct:  158 KLAPALAAGNCVVIKPSEITPLTALKLAALAKD--IFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAIK 241
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_SALPB (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ydcW PE=3 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 4.723e-15
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I +   E A LE+ +CGKPL   + D I  +   F ++A  A  L           LE   S + ++PI G+   I PWNYP
Sbjct:   54 EWGQTTPKARAECLLKLADSIEQNALEFARLESQNCGKPLHCVINDEIPAIVDVFRFFAGAARCLSGLAAGEY---LEGHTSMIRRDPI-GVVASIAPWNYP 151

HSP 2 Score: 49.6766 bits (117), Expect = 4.723e-15
Identity = 32/86 (37.21%), Postives = 43/86 (50.00%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   ++KPSE+  +T L+LA   K+     P  L +        G  L  H  V  ++ TGS ATG  I+   AP +K
Sbjct:  158 KLAPALAAGNCVVIKPSEITPLTALKLAALAKD--IFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAIK 241
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_SALCH (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella choleraesuis GN=ydcW PE=3 SV=2)

HSP 1 Score: 51.6026 bits (122), Expect = 4.723e-15
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I +   E A LE+ +CGKPL   + D I  +   F ++A  A  L           LE   S + ++PI G+   I PWNYP
Sbjct:   54 EWGQTTPKARAECLLKLADSIEQNALEFARLESQNCGKPLHCVINDEIPAIVDVFRFFAGAARCLSGLAAGEY---LEGHTSMIRRDPI-GVVASIAPWNYP 151

HSP 2 Score: 49.6766 bits (117), Expect = 4.723e-15
Identity = 32/86 (37.21%), Postives = 43/86 (50.00%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   ++KPSE+  +T L+LA   K+     P  L +        G  L  H  V  ++ TGS ATG  I+   AP +K
Sbjct:  158 KLAPALAAGNCVVIKPSEITPLTALKLAALAKD--IFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAIK 241
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ALDA_STAAR (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MRSA252) GN=aldA PE=3 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 6.131e-15
Identity = 35/105 (33.33%), Postives = 57/105 (54.29%), Query Frame = 1 
Query:   31 KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYPSI 342
            + WS  S + RA+ LR I  K+  +K ++A +ET++ GKP+ E    DI   A  F Y+A + E     ++  V+   ++  S V  EPI G+ G +  WN+P +
Sbjct:   64 ESWSLTSKSERAQMLRDIGDKLMAQKDKIAMIETLNNGKPIRETTAIDIPFAARHFHYFASVIE----TEEGTVNDIDKDTMSIVRHEPI-GVVGAVVAWNFPML 163

HSP 2 Score: 46.9802 bits (110), Expect = 6.131e-15
Identity = 30/91 (32.97%), Postives = 51/91 (56.04%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVKPVSL 626
            K  PA+AAG   +++PS    ++ LE+A+  +E    LP  ++ +      E+G  + +H  VDK++FTGS   G ++  AAA  + P +L
Sbjct:  168 KIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQE---VLPNGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATL 255
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: AL8A1_BOVIN (Aldehyde dehydrogenase family 8 member A1 OS=Bos taurus GN=ALDH8A1 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 6.133e-15
Identity = 42/103 (40.78%), Postives = 55/103 (53.40%), Query Frame = 3 
Query:  318 YSMELSLY*WPHGKWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVKPVSL 626
            +++ L L  W   K  PA+AAG   I KPSEL SVT   +   +++ G   P  + +     P  G  LVSHP V  I+FTGS  T  RIM  +AP  K +SL
Sbjct:  154 WNLPLYLLTW---KIAPAIAAGNTVIAKPSELTSVTAWMMCRLLEKAGVP-PGVVNIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERIMQLSAPHCKKLSL 252

HSP 2 Score: 36.1946 bits (82), Expect = 6.133e-15
Identity = 30/103 (29.13%), Postives = 47/103 (45.63%), Query Frame = 1 
Query:   37 WSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYAD--LAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            WSS S   R++ L+ +A  + +   ELA  E+ D GK +  A   DI      F ++A   L    +  Q   +         Y ++ P+ G+  LI+PWN P
Sbjct:   61 WSSRSPQERSQVLQRLADLLEQSLEELAQAESKDQGKTITLARTMDIPRAVHNFRFFASSILHHTSECTQMDHLGC-----LHYTVRAPV-GIAALISPWNLP 157
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ALDA_STAES (Putative aldehyde dehydrogenase aldA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=aldA PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 7.965e-15
Identity = 33/101 (32.67%), Postives = 52/101 (51.49%), Query Frame = 1 
Query:   37 WSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            WS  S   RA YL  I+ +I E+   LA +E++  GKP  E +  D+   A  F+Y+A +        +  V+   +N  S V+ EP+ G+ G +  WN+P
Sbjct:   67 WSKISKEERADYLLEISRRIHEKTEHLATVESLQNGKPYRETSTIDVPQAANQFKYFASVL----TTDEGSVNEIDQNTMSLVVNEPV-GVVGAVVAWNFP 162

HSP 2 Score: 46.2098 bits (108), Expect = 7.965e-15
Identity = 30/91 (32.97%), Postives = 48/91 (52.75%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVKPVSL 626
            K  PALAAG   +++PS    ++ +ELA+  +E    LP  ++ +      E+G  +  H  VDK++FTGS   G  +  A A  + P +L
Sbjct:  169 KLGPALAAGNTVVIQPSSSTPLSLIELAKIFQE---VLPKGVVNVLTGKGSESGDAIFHHEGVDKLSFTGSTDVGYGVAQAGAERIVPTTL 256
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ALDA_STAEQ (Putative aldehyde dehydrogenase aldA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=aldA PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 7.965e-15
Identity = 33/101 (32.67%), Postives = 52/101 (51.49%), Query Frame = 1 
Query:   37 WSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            WS  S   RA YL  I+ +I E+   LA +E++  GKP  E +  D+   A  F+Y+A +        +  V+   +N  S V+ EP+ G+ G +  WN+P
Sbjct:   67 WSKISKEERADYLLEISRRIHEKTEHLATVESLQNGKPYRETSTIDVPQAANQFKYFASVL----TTDEGSVNEIDQNTMSLVVNEPV-GVVGAVVAWNFP 162

HSP 2 Score: 46.2098 bits (108), Expect = 7.965e-15
Identity = 30/91 (32.97%), Postives = 48/91 (52.75%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVKPVSL 626
            K  PALAAG   +++PS    ++ +ELA+  +E    LP  ++ +      E+G  +  H  VDK++FTGS   G  +  A A  + P +L
Sbjct:  169 KLGPALAAGNTVVIQPSSSTPLSLIELAKIFQE---VLPKGVVNVLTGKGSESGDAIFHHEGVDKLSFTGSTDVGYGVAQAGAERIVPTTL 256
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: AL8A1_HUMAN (Aldehyde dehydrogenase family 8 member A1 OS=Homo sapiens GN=ALDH8A1 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 7.970e-15
Identity = 42/103 (40.78%), Postives = 54/103 (52.43%), Query Frame = 3 
Query:  318 YSMELSLY*WPHGKWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVKPVSL 626
            +++ L L  W   K  PA+AAG   I KPSEL SVT   L + + + G   P  + +     P  G  LVSHP V  I+FTGS  T  RI   +AP  K +SL
Sbjct:  154 WNLPLYLLTW---KIAPAMAAGNTVIAKPSELTSVTAWMLCKLLDKAGVP-PGVVNIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERITQLSAPHCKKLSL 252

HSP 2 Score: 37.7354 bits (86), Expect = 7.970e-15
Identity = 32/110 (29.09%), Postives = 48/110 (43.64%), Query Frame = 1 
Query:   16 SRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYAD--LAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +R     WSS S   R++ L  +A  + +   E A  E+ D GK L  A   DI      F ++A   L    +  Q   +         Y ++ P+ G+ GLI+PWN P
Sbjct:   54 AREAFPSWSSRSPQERSRVLNQVADLLEQSLEEFAQAESKDQGKTLALARTMDIPRSVQNFRFFASSSLHHTSECTQMDHLGC-----MHYTVRAPV-GVAGLISPWNLP 157
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 1.035e-14
Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 3 
Query:  312 IDYSMELSLY*WPHGKWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAA 602
            I ++  L ++ W  G   PA+AAG   +LK +E   ++ L  A+ +KE G       ++S  +   AGA + SH  +DK+AFTGS   G  I+ AAA
Sbjct:  162 IPWNFPLLMWSWKIG---PAVAAGNTVVLKTAEQTPLSALYAAKLIKEAGFPAGVINVIS-GFGRTAGAAISSHMDIDKVAFTGSTLVGRTILQAAA 254

HSP 2 Score: 43.5134 bits (101), Expect = 1.035e-14
Identity = 29/102 (28.43%), Postives = 47/102 (46.08%), Query Frame = 1 
Query:   37 WSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAK--QKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            W   + + R   +  +A  +      LA +E++D GK    A  D+ +  GC  YYA  A+ +  +     P +L      +Y   EP+ G+ G I PWN+P
Sbjct:   73 WRQVTPSERGILINKLADLMERDIDTLAAIESLDNGKAFTMAKVDLANSIGCLRYYAGWADKIHGQTIDTNPETL------TYTRHEPV-GVCGQIIPWNFP 167
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_PECCP (Gamma-aminobutyraldehyde dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=PC1_1415 PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.036e-14
Identity = 34/101 (33.66%), Postives = 47/101 (46.53%), Query Frame = 1 
Query:   37 WSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            W   +   RA  L  IA  I E     A LE+++CGKP   A+ D +  VA  F ++A  A  L           LE   S + ++P+ G+   I PWNYP
Sbjct:   55 WGQTTPKTRATLLLQIADAIEENAEAFARLESLNCGKPYHAALNDEVPAVADVFRFFAGAARCLSGSAAGEY---LEGHTSMIRRDPV-GVVASIAPWNYP 151

HSP 2 Score: 45.8246 bits (107), Expect = 1.036e-14
Identity = 32/87 (36.78%), Postives = 46/87 (52.87%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   +LKP+E   +T   LA  + E    LPA ++ +      + G  L  H  V+ ++ TGS ATG+ I++  A  VK
Sbjct:  158 KLAPALAAGNCVVLKPAEQTPLTTFYLAHLLAE---ILPAGVVNIVFGRGADIGDALTGHEKVNMVSLTGSIATGAHILSHTASSVK 241
The following BLAST results are available for this feature:
BLAST of CF417141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
ABDH_SALTI4.723e-1532.35Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
ABDH_SALPB4.723e-1532.35Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
ABDH_SALCH4.723e-1532.35Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
ALDA_STAAR6.131e-1533.33Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
AL8A1_BOVIN6.133e-1540.78Aldehyde dehydrogenase family 8 member A1 OS=Bos t... [more]
ALDA_STAES7.965e-1532.67Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAEQ7.965e-1532.67Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
AL8A1_HUMAN7.970e-1540.78Aldehyde dehydrogenase family 8 member A1 OS=Homo ... [more]
ALDH_EMENI1.035e-1436.08Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
ABDH_PECCP1.036e-1433.66Gamma-aminobutyraldehyde dehydrogenase OS=Pectobac... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-071 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417141 ID=CF417141; Name=CF417141; organism=Citrus sinensis; type=EST; length=634bp
GCCCGTCAAGCACTTTCTAGAAACAAAGGGAAGGATTGGTCCTCTGCATC
CGGGGCATTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTAAGATAACAG
AGAGGAAGTCTGAACTGGCAAACCTTGAAACGATTGATTGTGGGAAGCCA
CTGGAAGAAGCTGTTTGGGACATCGATGATGTTGCTGGGTGTTTTGAGTA
CTATGCAGACCTTGCTGAAGGCTTAGATGCCAAACAAAAGGCTCCTGTTT
CTCTTCCTCTGGAGAATTTCAAGAGTTATGTACTTAAGGAACCCATTTGG
GGGTTGTTTGGATTGATTACTCCATGGAATTATCCCTCTATTGATGGCCA
CATGGAAAGTGGCCTCCTGCGTTGGCAGCAGGATGCGCTGCAATATTAAA
GCCATCTGAATTGGCGTCTGTGACCTGTTTGGAGCTTGCTGAATGTGTNA
AAGAAGGTGGGTCTTCCCTCCCGGCGTTCTTAATATTGTCACCGGATTGG
GTCCCTGAAGCTGGGGCTCCTTTGGTATCCCATCCCCACGTTGACAAGAT
TGCATTTACTGGAAGCAATGCAACAGGGAGCAGGATAATGGCAGCTGCAG
CTCCGATGGTCAAGCCTGTTTCTTTGGGAGCTGG
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