CF417141

Overview
NameCF417141
Unique NameCF417141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig437 contig Csv1_Contig437:1..631. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_ECO5E (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.136e-17
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   +LKPSE+  +T L+LAE  K+     PA +I +        G PL  HP V  ++ TGS ATG  I++  AP +K
Sbjct:  158 KLAPALAAGNCVVLKPSEITPLTALKLAELAKD---IFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIK 241

HSP 2 Score: 51.2174 bits (121), Expect = 1.136e-17
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I E     A LE+ +CGKPL  A  D I  +   F ++A  A  L+          LE   S + ++P+ G+   I PWNYP
Sbjct:   54 EWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY---LEGHTSMIRRDPL-GVVASIAPWNYP 151
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_ECO57 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=ydcW PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.136e-17
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   +LKPSE+  +T L+LAE  K+     PA +I +        G PL  HP V  ++ TGS ATG  I++  AP +K
Sbjct:  158 KLAPALAAGNCVVLKPSEITPLTALKLAELAKD---IFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIK 241

HSP 2 Score: 51.2174 bits (121), Expect = 1.136e-17
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I E     A LE+ +CGKPL  A  D I  +   F ++A  A  L+          LE   S + ++P+ G+   I PWNYP
Sbjct:   54 EWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY---LEGHTSMIRRDPL-GVVASIAPWNYP 151
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_ESCF3 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ydcW PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.477e-17
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   +LKPSE+  +T L+LAE  K+     PA +I +        G PL  HP V  ++ TGS ATG  I++  AP +K
Sbjct:  158 KLAPALAAGNCVVLKPSEITPLTALKLAELAKD---IFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIK 241

HSP 2 Score: 50.8322 bits (120), Expect = 1.477e-17
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I E     A LE+ +CGKPL  A  D I  +   F ++A  A  L+          LE   S + ++P+ G+   I PWNYP
Sbjct:   54 EWGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY---LEGHTSMIRRDPL-GVVASIAPWNYP 151
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_ECOUT (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.477e-17
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   +LKPSE+  +T L+LAE  K+     PA +I +        G PL  HP V  ++ TGS ATG  I++  AP +K
Sbjct:  158 KLAPALAAGNCVVLKPSEITPLTALKLAELAKD---IFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIK 241

HSP 2 Score: 50.8322 bits (120), Expect = 1.477e-17
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I E     A LE+ +CGKPL  A  D I  +   F ++A  A  L+          LE   S + ++P+ G+   I PWNYP
Sbjct:   54 EWGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY---LEGHTSMIRRDPL-GVVASIAPWNYP 151
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_ECOSM (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.477e-17
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   +LKPSE+  +T L+LAE  K+     PA +I +        G PL  HP V  ++ TGS ATG  I++  AP +K
Sbjct:  158 KLAPALAAGNCVVLKPSEITPLTALKLAELAKD---IFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIK 241

HSP 2 Score: 50.8322 bits (120), Expect = 1.477e-17
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I E     A LE+ +CGKPL  A  D I  +   F ++A  A  L+          LE   S + ++P+ G+   I PWNYP
Sbjct:   54 EWGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY---LEGHTSMIRRDPL-GVVASIAPWNYP 151
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_ECOLU (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.477e-17
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   +LKPSE+  +T L+LAE  K+     PA +I +        G PL  HP V  ++ TGS ATG  I++  AP +K
Sbjct:  158 KLAPALAAGNCVVLKPSEITPLTALKLAELAKD---IFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIK 241

HSP 2 Score: 50.8322 bits (120), Expect = 1.477e-17
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I E     A LE+ +CGKPL  A  D I  +   F ++A  A  L+          LE   S + ++P+ G+   I PWNYP
Sbjct:   54 EWGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY---LEGHTSMIRRDPL-GVVASIAPWNYP 151
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_ECOL6 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O6 GN=ydcW PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.477e-17
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   +LKPSE+  +T L+LAE  K+     PA +I +        G PL  HP V  ++ TGS ATG  I++  AP +K
Sbjct:  158 KLAPALAAGNCVVLKPSEITPLTALKLAELAKD---IFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIK 241

HSP 2 Score: 50.8322 bits (120), Expect = 1.477e-17
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I E     A LE+ +CGKPL  A  D I  +   F ++A  A  L+          LE   S + ++P+ G+   I PWNYP
Sbjct:   54 EWGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY---LEGHTSMIRRDPL-GVVASIAPWNYP 151
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_ECOL5 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.477e-17
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   +LKPSE+  +T L+LAE  K+     PA +I +        G PL  HP V  ++ TGS ATG  I++  AP +K
Sbjct:  158 KLAPALAAGNCVVLKPSEITPLTALKLAELAKD---IFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIK 241

HSP 2 Score: 50.8322 bits (120), Expect = 1.477e-17
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I E     A LE+ +CGKPL  A  D I  +   F ++A  A  L+          LE   S + ++P+ G+   I PWNYP
Sbjct:   54 EWGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY---LEGHTSMIRRDPL-GVVASIAPWNYP 151
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_ECOK1 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=ydcW PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.477e-17
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   +LKPSE+  +T L+LAE  K+     PA +I +        G PL  HP V  ++ TGS ATG  I++  AP +K
Sbjct:  158 KLAPALAAGNCVVLKPSEITPLTALKLAELAKD---IFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIK 241

HSP 2 Score: 50.8322 bits (120), Expect = 1.477e-17
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I E     A LE+ +CGKPL  A  D I  +   F ++A  A  L+          LE   S + ++P+ G+   I PWNYP
Sbjct:   54 EWGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY---LEGHTSMIRRDPL-GVVASIAPWNYP 151
[Close]
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ABDH_ECO81 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O81 (strain ED1a) GN=ydcW PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.477e-17
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 3 
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLI-LSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVK 614
            K  PALAAG   +LKPSE+  +T L+LAE  K+     PA +I +        G PL  HP V  ++ TGS ATG  I++  AP +K
Sbjct:  158 KLAPALAAGNCVVLKPSEITPLTALKLAELAKD---IFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIK 241

HSP 2 Score: 50.8322 bits (120), Expect = 1.477e-17
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:   34 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            +W   +   RA+ L  +A  I E     A LE+ +CGKPL  A  D I  +   F ++A  A  L+          LE   S + ++P+ G+   I PWNYP
Sbjct:   54 EWGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY---LEGHTSMIRRDPL-GVVASIAPWNYP 151
The following BLAST results are available for this feature:
BLAST of CF417141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
ABDH_ECO5E1.136e-1742.53Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO571.136e-1742.53Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ESCF31.477e-1742.53Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOUT1.477e-1742.53Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOSM1.477e-1742.53Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOLU1.477e-1742.53Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOL61.477e-1742.53Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOL51.477e-1742.53Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOK11.477e-1742.53Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO811.477e-1742.53Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-071 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417141 ID=CF417141; Name=CF417141; organism=Citrus sinensis; type=EST; length=634bp
GCCCGTCAAGCACTTTCTAGAAACAAAGGGAAGGATTGGTCCTCTGCATC
CGGGGCATTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTAAGATAACAG
AGAGGAAGTCTGAACTGGCAAACCTTGAAACGATTGATTGTGGGAAGCCA
CTGGAAGAAGCTGTTTGGGACATCGATGATGTTGCTGGGTGTTTTGAGTA
CTATGCAGACCTTGCTGAAGGCTTAGATGCCAAACAAAAGGCTCCTGTTT
CTCTTCCTCTGGAGAATTTCAAGAGTTATGTACTTAAGGAACCCATTTGG
GGGTTGTTTGGATTGATTACTCCATGGAATTATCCCTCTATTGATGGCCA
CATGGAAAGTGGCCTCCTGCGTTGGCAGCAGGATGCGCTGCAATATTAAA
GCCATCTGAATTGGCGTCTGTGACCTGTTTGGAGCTTGCTGAATGTGTNA
AAGAAGGTGGGTCTTCCCTCCCGGCGTTCTTAATATTGTCACCGGATTGG
GTCCCTGAAGCTGGGGCTCCTTTGGTATCCCATCCCCACGTTGACAAGAT
TGCATTTACTGGAAGCAATGCAACAGGGAGCAGGATAATGGCAGCTGCAG
CTCCGATGGTCAAGCCTGTTTCTTTGGGAGCTGG
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