CF417142
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417142 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.947e-25 Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 3 Query: 57 ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 326 ++CG V LAPCI YLRS GP+PV CCNGV++L +A TT DR+TAC CL A+ SI +N A GLP CGV+IPYKIS ST+C +V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVACCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90
BLAST of CF417142 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.169e-24 Identity = 56/110 (50.91%), Postives = 75/110 (68.18%), Query Frame = 3 Query: 6 SALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP---CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 326 + +V+ +L+ P +A A+TCGQV LAPCI+Y + G + P CC+GVR+LN+AA TT DRQT C CLKQ ++ L P+ G+P CGV+IPY IS STDCS+V Sbjct: 12 AVMVVALLLAAP-AASAVTCGQVVSMLAPCIMY--ATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of CF417142 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.292e-23 Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 3 Query: 9 ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 329 A+V ML+ + AI+CGQV+ +L+PCI Y R +G PV CC+GV+ L AA++T D+Q AC C+K AAG LN A G+P CGVS+PY IS S DCSK+R Sbjct: 13 AMVAAMLIVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF417142 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.204e-23 Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 3 Query: 3 VSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPV-PCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 326 ++A ++ ML P +A A+ CGQV + PC+ Y++ GGP P CCNGVR L+ A+++ DRQT CNCLK A I NLN NNA +P C V++PY IS DCS++ Sbjct: 9 MAAALVLMLTAAPRAAVALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CF417142 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.204e-23 Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 3 Query: 9 ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 329 A+V ML+ + AI+CGQV+ +L+PCI Y R +G PV CC+GV+ L AA++T D+Q AC C+K AAG LN A G+P CGVS+PY IS S DCSK+R Sbjct: 13 AMVAAMLLVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF417142 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.878e-23 Identity = 56/108 (51.85%), Postives = 73/108 (67.59%), Query Frame = 3 Query: 12 LVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 329 +++CMLVT P++++A I+CG VTGSL C YL GG IP CC+GV+ LN+ ARTT DRQ AC C++ AA ++ LN A LP AC V I Y IS T+C+ VR Sbjct: 11 VIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of CF417142 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.878e-23 Identity = 57/112 (50.89%), Postives = 72/112 (64.29%), Query Frame = 3 Query: 6 SALVLCMLVTGPL---SAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 329 S LVL LV L + AI+CGQV+ +L+PCI Y R +G P CC+GV+ L AA++T D+Q AC C+K AAG LN A G+P CGVS+PY IS S DCSK+R Sbjct: 7 SQLVLVALVAAMLLVAADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF417142 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 8.375e-23 Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 3 Query: 57 ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 326 ++CG V +A CI YLR GP+P CCNGV++L +A TT DR+TAC CL A+ +I +N A GLP CGVSIPYKIS ST+C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAACCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of CF417142 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.375e-23 Identity = 53/107 (49.53%), Postives = 72/107 (67.29%), Query Frame = 3 Query: 9 ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 326 A+V ML+ + AI+CGQV+ +L+PCI Y R +G PV CC+GV+ L AA++T D+Q AC CLK A SI +N G+P CGVS+P+ IS+STDC+KV Sbjct: 13 AMVAAMLLVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CF417142 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.866e-22 Identity = 48/108 (44.44%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 3 VSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 326 ++ L++ + + I CG VT +LA C+ YL + GP+P CC GV+SL A+TTPDR+ C CLK A I LN + LP CGVSIPY IS ST+C + Sbjct: 8 ITCLIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115 The following BLAST results are available for this feature:
BLAST of CF417142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417142 ID=CF417142; Name=CF417142; organism=Citrus sinensis; type=EST; length=569bpback to top |