CF417143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 2.591e-60 Identity = 111/133 (83.46%), Postives = 115/133 (86.47%), Query Frame = 2 Query: 191 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G + E RV G LGEV DPLYP GSFDP+ Sbjct: 71 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV--EGYRVA---GGPLGEVVDPLYPGGSFDPL 198 HSP 2 Score: 32.7278 bits (73), Expect = 2.591e-60 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 3 Query: 573 PLGLADDPEAFAELK 617 PLGLA+DPEAFAELK Sbjct: 197 PLGLAEDPEAFAELK 211 HSP 3 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 71/183 (38.80%), Postives = 92/183 (50.27%), Query Frame = 1 Query: 4 ALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGP 525 ALSS F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYL P + W + L +P T + ++ + W L P L G LG P ++ + + + MGAVEGYR+AGGP Sbjct: 7 ALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-VHAQSILAIWACQVVLMGAVEGYRVAGGP 181
BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 3.378e-60 Identity = 107/129 (82.95%), Postives = 112/129 (86.82%), Query Frame = 2 Query: 191 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L + + G LGEV DPLYP GSFDP+ Sbjct: 70 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL-MGAVEGYRIAGGPLGEVVDPLYPGGSFDPL 197 HSP 2 Score: 32.7278 bits (73), Expect = 3.378e-60 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 3 Query: 573 PLGLADDPEAFAELK 617 PLGLA+DPEAFAELK Sbjct: 196 PLGLAEDPEAFAELK 210 HSP 3 Score: 99.7525 bits (247), Expect = 1.195e-20 Identity = 72/183 (39.34%), Postives = 90/183 (49.18%), Query Frame = 1 Query: 1 MALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGP 525 MALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGPFSGE PSYL P + W + L +P T + ++ + W L P L G LG P ++ + + + MGAVEGYRIAGGP Sbjct: 6 MALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-VHAQSILAIWACQVVLMGAVEGYRIAGGP 180
BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 3.378e-60 Identity = 110/133 (82.71%), Postives = 114/133 (85.71%), Query Frame = 2 Query: 191 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G + E RV G LGEV DPLYP GSFDP+ Sbjct: 71 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV--EGYRVA---GGPLGEVIDPLYPGGSFDPL 198 HSP 2 Score: 34.2686 bits (77), Expect = 3.378e-60 Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 Query: 573 PLGLADDPEAFAELK 617 PLGLADDPEAFAELK Sbjct: 197 PLGLADDPEAFAELK 211 HSP 3 Score: 92.4337 bits (228), Expect = 1.908e-18 Identity = 71/182 (39.01%), Postives = 93/182 (51.10%), Query Frame = 1 Query: 10 SSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRLPGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPD----PRSEHLGHLGFARWS----WMGAVEGYRIAGGP 525 SSSF GKAVN+ PS ++++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYL P + W + L +P T + ++ + W L GAL + + + E D P H + A W+ MGAVEGYR+AGGP Sbjct: 10 SSSFAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHCRWAML-GALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSI-LAIWACQVVLMGAVEGYRVAGGP 181
BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 3.379e-60 Identity = 108/134 (80.60%), Postives = 114/134 (85.07%), Query Frame = 2 Query: 176 PQATWTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577 P + TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA+ L + + G LGEV DPLYP GSFDP+ Sbjct: 61 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVL-MGAVEGYRIAGGPLGEVVDPLYPGGSFDPL 193 HSP 2 Score: 34.2686 bits (77), Expect = 3.379e-60 Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 Query: 573 PLGLADDPEAFAELK 617 PLGLADDPEAFAELK Sbjct: 192 PLGLADDPEAFAELK 206 HSP 3 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 64/185 (34.59%), Postives = 83/185 (44.86%), Query Frame = 1 Query: 1 MALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGP 525 MALSS + GKA ++ GRI+MRK+ +K +SGSPWYG DRV YLGP SGEPPSYL P + W + L +P T + ++ + S W L P L G LG P ++ + + + MGAVEGYRIAGGP Sbjct: 6 MALSSPALAGKAAA------KVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-IHAQSILAIWAVQVVLMGAVEGYRIAGGP 176
BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 5.743e-60 Identity = 107/134 (79.85%), Postives = 114/134 (85.07%), Query Frame = 2 Query: 176 PQATWTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577 P + TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA+ L + + G LGEV DPLYP G+FDP+ Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVL-MGAVEGYRIAGGPLGEVVDPLYPGGAFDPL 197 HSP 2 Score: 34.6538 bits (78), Expect = 5.743e-60 Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 564 ALIPLGLADDPEAFAELK 617 A PLGLADDPEAFAELK Sbjct: 193 AFDPLGLADDPEAFAELK 210 HSP 3 Score: 76.6406 bits (187), Expect = 1.084e-13 Identity = 67/186 (36.02%), Postives = 85/186 (45.70%), Query Frame = 1 Query: 1 MALSSSFVGKAVNLAPS-GNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGP 525 MALSS + +A APS + L RI+MRKT +K + SSGSPWYG DRV YLGP SGEPPSYL P + W + L +P T + ++ + S W L P L G LG P ++ + + + MGAVEGYRIAGGP Sbjct: 6 MALSSPVMARA---APSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-IHAQSILAIWAVQVVLMGAVEGYRIAGGP 180
BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.744e-60 Identity = 110/138 (79.71%), Postives = 117/138 (84.78%), Query Frame = 2 Query: 176 PQATWTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577 P + TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA L G + E R+ G LGEVTDP+YP GSFDP+ Sbjct: 63 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAV--EGYRIA---GGPLGEVTDPIYPGGSFDPL 195 HSP 2 Score: 34.2686 bits (77), Expect = 5.744e-60 Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 Query: 573 PLGLADDPEAFAELK 617 PLGLADDPEAFAELK Sbjct: 194 PLGLADDPEAFAELK 208 HSP 3 Score: 102.064 bits (253), Expect = 2.408e-21 Identity = 79/193 (40.93%), Postives = 94/193 (48.70%), Query Frame = 1 Query: 1 MALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGPPR*SD*PIVP 555 MALSS S GKAV L PS E+ GR+SMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYL P + W + L +P T + ++ + S W L P L G LG P ++ + + + MGAVEGYRIAGGP PI P Sbjct: 7 MALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-IHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYP 188
BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 7.488e-60 Identity = 110/133 (82.71%), Postives = 114/133 (85.71%), Query Frame = 2 Query: 191 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577 TGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G + E RV G LGEV DPLYP GSFDP+ Sbjct: 72 TGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV--EGYRVA---GGPLGEVVDPLYPGGSFDPL 199 HSP 2 Score: 34.2686 bits (77), Expect = 7.488e-60 Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 Query: 573 PLGLADDPEAFAELK 617 PLGLADDPEAFAELK Sbjct: 198 PLGLADDPEAFAELK 212 HSP 3 Score: 96.6709 bits (239), Expect = 1.012e-19 Identity = 71/185 (38.38%), Postives = 92/185 (49.73%), Query Frame = 1 Query: 1 MALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGP 525 MALSS SF GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYL P + W + L +P T + ++ + W L P L G LG P ++ + + + MGAVEGYR+AGGP Sbjct: 6 MALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPG----DYGWDTA---ELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-VHAQSILAIWACQVVLMGAVEGYRVAGGP 182
BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 7.492e-60 Identity = 106/134 (79.10%), Postives = 114/134 (85.07%), Query Frame = 2 Query: 176 PQATWTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577 P + TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L + + G LGEVTDP+YP GSFDP+ Sbjct: 55 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL-MGAVEGYRIAGGPLGEVTDPIYPGGSFDPL 187 HSP 2 Score: 34.2686 bits (77), Expect = 7.492e-60 Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 Query: 573 PLGLADDPEAFAELK 617 PLGLADDPEAFAELK Sbjct: 186 PLGLADDPEAFAELK 200 HSP 3 Score: 99.3673 bits (246), Expect = 1.561e-20 Identity = 70/187 (37.43%), Postives = 89/187 (47.59%), Query Frame = 1 Query: 16 SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGPPR*SD*PIVP 555 + G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGPFSGEPPSYL P + W + L +P T + ++ + S W L P L G LG P ++ + + + MGAVEGYRIAGGP PI P Sbjct: 2 TLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-VHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180
BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.273e-59 Identity = 107/134 (79.85%), Postives = 113/134 (84.33%), Query Frame = 2 Query: 176 PQATWTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577 P + TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA L + + G LGEV DPLYP GSFDP+ Sbjct: 62 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL-MGAVEGYRIAGGPLGEVVDPLYPGGSFDPL 194 HSP 2 Score: 34.2686 bits (77), Expect = 1.273e-59 Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 Query: 573 PLGLADDPEAFAELK 617 PLGLADDPEAFAELK Sbjct: 193 PLGLADDPEAFAELK 207 HSP 3 Score: 79.337 bits (194), Expect = 1.672e-14 Identity = 66/185 (35.68%), Postives = 84/185 (45.41%), Query Frame = 1 Query: 1 MALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGP 525 MA+SS+ G + + G GRI+MRKT K +SGSPWYGPDRVKYLGPFSGEPPSYL P + W + L +P T + ++ + S W L P L G LG P ++ + + + MGAVEGYRIAGGP Sbjct: 6 MAISSTAMAGTPIKVGSFGE-----GRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-IHAQSILAIWACQVVLMGAVEGYRIAGGP 177
BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 2.164e-59 Identity = 110/133 (82.71%), Postives = 114/133 (85.71%), Query Frame = 2 Query: 191 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G + E RV LGEV DPLYP GSFDP+ Sbjct: 71 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV--EGYRVA---GEPLGEVVDPLYPGGSFDPL 198 HSP 2 Score: 32.7278 bits (73), Expect = 2.164e-59 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 3 Query: 573 PLGLADDPEAFAELK 617 PLGLA+DPEAFAELK Sbjct: 197 PLGLAEDPEAFAELK 211 HSP 3 Score: 98.2117 bits (243), Expect = 3.477e-20 Identity = 69/183 (37.70%), Postives = 91/183 (49.73%), Query Frame = 1 Query: 4 ALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGP 525 ALSS F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYL P + W + L +P T + ++ + W L P L G LG P ++ + + + MGAVEGYR+AG P Sbjct: 7 ALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-VHAQSILAIWACQVVLMGAVEGYRVAGEP 181 The following BLAST results are available for this feature:
BLAST of CF417143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417143 ID=CF417143; Name=CF417143; organism=Citrus sinensis; type=EST; length=617bpback to top |