CF417143 | Citrus Genome Database

Overview


Name	CF417143
Unique Name	CF417143
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	617

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig10990	contig	Csv1_Contig10990:727..1338.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.221e-58
Identity = 107/139 (76.98%), Postives = 116/139 (83.45%), Query Frame = 2

Query:  173 SPQATWTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577
            SP +  +GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF+EGGLDYLGNPSL+HAQSILAIWA    L G +  E  RV     G LGEV DP+YP GSFDP+
Sbjct:   64 SPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAV--EGYRVA---GGPLGEVEDPIYPGGSFDPL 197

HSP 2 Score: 34.2686 bits (77), Expect = 5.221e-58
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3

Query:  573 PLGLADDPEAFAELK 617
            PLGLADDPEAFAELK
Sbjct:  196 PLGLADDPEAFAELK 210

[Close]

BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 5.226e-58
Identity = 109/138 (78.99%), Postives = 115/138 (83.33%), Query Frame = 2

Query:  176 PQATWTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577
            P +  TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAG+QIFSEGGLDYLGN SLIHAQSILAIWA    L G +  E  R+     G LGEVTDP+YP GSFDP+
Sbjct:   45 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAV--EGYRIA---GGPLGEVTDPIYPGGSFDPL 177

HSP 2 Score: 31.9574 bits (71), Expect = 5.226e-58
Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  573 PLGLADDPEAFAELK 617
            PL LADDPEAFAELK
Sbjct:  176 PLALADDPEAFAELK 190

HSP 3 Score: 90.5077 bits (223), Expect = 7.251e-18
Identity = 69/172 (40.12%), Postives = 84/172 (48.84%), Query Frame = 1

Query:   73 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRLPGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLG-------FARWS----WMGAVEGYRIAGGPPR*SD*PIVP 555
            GR+SMRKT SK+VSSGSPWYGPDRVKYLGPFSGEPPSYL    P      + W  +    L  +P T +   ++  + S W  L GAL                     +  + +  E   D    +LG+          A W+     MGAVEGYRIAGGP      PI P
Sbjct:   11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHSRWAML-GALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLD----YLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYP 170

[Close]

BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 8.874e-58
Identity = 104/134 (77.61%), Postives = 113/134 (84.33%), Query Frame = 2

Query:  176 PQATWTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577
            P +  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA WFKAG+QIFS+GGLDYLGNPSL+HAQS+LAIWA    L    +    +  G LGE+ DPLYP GSFDP+
Sbjct:   66 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVL-MGAVEGYRIAGGPLGEIVDPLYPGGSFDPL 198

HSP 2 Score: 28.4906 bits (62), Expect = 8.874e-58
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  573 PLGLADDPEAFAELK 617
            PLGLA+ P+AFAELK
Sbjct:  197 PLGLAERPQAFAELK 211

HSP 3 Score: 81.2629 bits (199), Expect = 4.399e-15
Identity = 67/181 (37.02%), Postives = 83/181 (45.86%), Query Frame = 1

Query:   10 SSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGP 525
            SSSF GKAV   PS + L    R++MRKT +K+  VSS SPWYG DRV YLGP SGEPPSYL    P      + W  +    L  +P T +   ++  +   W  L       P  L                      G    LG P     ++ L  +   +   MGAVEGYRIAGGP
Sbjct:   10 SSSFAGKAVKNLPS-SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSL-VHAQSLLAIWACQVVLMGAVEGYRIAGGP 181

[Close]

BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.157e-57
Identity = 106/133 (79.70%), Postives = 111/133 (83.46%), Query Frame = 2

Query:  191 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577
            TGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL ARNGVKFGEAVWFKAG+QIF EGGLDYLGNPSL+HAQSILAIWA    L G +  E  RV     G LGEV DPLYP GSFDP+
Sbjct:   71 TGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV--EGYRVA---GGPLGEVIDPLYPGGSFDPL 198

HSP 2 Score: 32.7278 bits (73), Expect = 1.157e-57
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 3

Query:  573 PLGLADDPEAFAELK 617
            PLGLADDPEAFAEL+
Sbjct:  197 PLGLADDPEAFAELE 211

HSP 3 Score: 94.3597 bits (233), Expect = 5.021e-19
Identity = 71/185 (38.38%), Postives = 94/185 (50.81%), Query Frame = 1

Query:    1 MALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGP 525
            MALSSS F GKAVN+ PS +E++  G+++MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYL    P      + W  +    L  +P T +   ++  +   W  L       P                       + G    LG P     ++ +  +   +   MGAVEGYR+AGGP
Sbjct:    6 MALSSSSFAGKAVNV-PSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPG----DYGWDTA---GLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSL-VHAQSILAIWACQVVLMGAVEGYRVAGGP 181

[Close]

BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.159e-57
Identity = 108/133 (81.20%), Postives = 114/133 (85.71%), Query Frame = 2

Query:  191 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577
            TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA    L G +  E  R+     G LGEV DPLYP GSFDP+
Sbjct:   33 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV--EGYRIA---GGPLGEVVDPLYPGGSFDPL 160

HSP 2 Score: 29.261 bits (64), Expect = 1.159e-57
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  573 PLGLADDPEAFAELK 617
            PLGLA+ PEAFAELK
Sbjct:  159 PLGLAEVPEAFAELK 173

[Close]

BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.967e-57
Identity = 105/131 (80.15%), Postives = 114/131 (87.02%), Query Frame = 2

Query:  191 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALPGGL-GW-EPLRVTELLEGRLGEVTDPLYPXGSFDPI 577
            TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA    L G+ E  RV     G LGE  DP+YP G+FDP+
Sbjct:   70 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVG---GGPLGEGLDPIYPGGAFDPL 197

HSP 2 Score: 33.4982 bits (75), Expect = 1.967e-57
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 3

Query:  564 ALIPLGLADDPEAFAELK 617
            A  PLGLADDP+AFAELK
Sbjct:  193 AFDPLGLADDPDAFAELK 210

[Close]

BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.343e-57
Identity = 108/133 (81.20%), Postives = 114/133 (85.71%), Query Frame = 2

Query:  191 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577
            TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSIL+IWA    L G +  E  RV     G LGE+ DPLYP GSFDP+
Sbjct:   69 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAV--EGYRVA---GGPLGEIVDPLYPGGSFDPL 196

HSP 2 Score: 27.7202 bits (60), Expect = 3.343e-57
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 3

Query:  573 PLGLADDPEAFAELK 617
            PLGLA+DPE  AELK
Sbjct:  195 PLGLAEDPERSAELK 209

HSP 3 Score: 93.5893 bits (231), Expect = 8.565e-19
Identity = 71/183 (38.80%), Postives = 88/183 (48.09%), Query Frame = 1

Query:    1 MALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGP 525
            MALSS +  GKAV +APS +EL   GR+SMRKT    VS  SPWYGPDRVKYLGPFSGE PSYL    P      + W  +    L  +P T +   ++  + S W  L       P  L                      G    LG P     ++ +  +   +   MGAVEGYR+AGGP
Sbjct:    6 MALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSD-SPWYGPDRVKYLGPFSGEAPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-VHAQSILSIWATQVILMGAVEGYRVAGGP 179

[Close]

BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.343e-57
Identity = 108/133 (81.20%), Postives = 112/133 (84.21%), Query Frame = 2

Query:  191 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577
            TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK G+QIFSEGGL YLGNPSL+HAQSILAIWA    L G +  E  RV     G LGEV DPLYP GSFDP+
Sbjct:   69 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAV--EGYRVA---GGPLGEVVDPLYPGGSFDPL 196

HSP 2 Score: 31.187 bits (69), Expect = 3.343e-57
Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  573 PLGLADDPEAFAELK 617
            PLGLADD EAFAELK
Sbjct:  195 PLGLADDAEAFAELK 209

HSP 3 Score: 85.8853 bits (211), Expect = 1.786e-16
Identity = 67/183 (36.61%), Postives = 84/183 (45.90%), Query Frame = 1

Query:    1 MALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGP 525
            MALSSS F GKAV    S +E+    R+SMRKT +     GSPWYGPDRVKYLGPFSGE PSYL    P      + W  +    L  +P T +   ++  +   W  L       P  L                      G    LG P     ++ +  +   +   MGAVEGYR+AGGP
Sbjct:    6 MALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATK-KVGSPWYGPDRVKYLGPFSGESPSYLTGEFPG----DYGWDTA---GLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSL-VHAQSILAIWACQVVLMGAVEGYRVAGGP 179

[Close]

BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.259e-56
Identity = 104/133 (78.20%), Postives = 113/133 (84.96%), Query Frame = 2

Query:  191 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577
            TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA    L G +  E  RV     G LGE  DPLYP G+FDP+
Sbjct:   69 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLI--EGYRVG---GGPLGEGLDPLYPGGAFDPL 196

HSP 2 Score: 34.6538 bits (78), Expect = 1.259e-56
Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = 3

Query:  564 ALIPLGLADDPEAFAELK 617
            A  PLGLADDPEAFAELK
Sbjct:  192 AFDPLGLADDPEAFAELK 209

[Close]

BLAST of CF417143 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.641e-56
Identity = 106/133 (79.70%), Postives = 112/133 (84.21%), Query Frame = 2

Query:  191 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLYPXGSFDPI 577
            TGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA    L G +  E  RV     G LGE  D LYP GSFDP+
Sbjct:   71 TGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAV--EGYRVAG--NGPLGEAEDLLYPGGSFDPL 199

HSP 2 Score: 31.5722 bits (70), Expect = 1.641e-56
Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  573 PLGLADDPEAFAELK 617
            PLGLA DPEAFAELK
Sbjct:  198 PLGLATDPEAFAELK 212

HSP 3 Score: 88.1965 bits (217), Expect = 3.599e-17
Identity = 68/185 (36.76%), Postives = 89/185 (48.11%), Query Frame = 1

Query:    1 MALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW*LRLGHCWAFS*PRNLCQEP*TRSHPLQMGHVGSSWMRL-------PGALXXXXXXXXXXXXXXXXXXDLQRGRA*LLGEPKPDPRSEHLGHLGFARWSWMGAVEGYRIAGGPP 528
            MALSS +F GKAV L+P+ +E+   GR++MRKT +K    SGSPWYG DRVKYLGPFSGE PSYL    P      + W  +    L  +P T +   ++  + S W  L       P  L                      G    LG P     ++ +  +   +   MGAVEGYR+AG  P
Sbjct:    6 MALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPG----DYGWDTA---GLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSL-VHAQSILAIWATQVILMGAVEGYRVAGNGP 182

The following BLAST results are available for this feature:

BLAST of CF417143 vs. ExPASy Swiss-Prot

BLAST of CF417143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65


Match Name	E-value	Identity	Description
CB23_POLMU	5.221e-58	76.98	Chlorophyll a-b binding protein type 1 member F3, ...	[more]
CB21_SOYBN	5.226e-58	78.99	Chlorophyll a-b binding protein, chloroplastic (Fr...	[more]
CB21_WHEAT	8.874e-58	77.61	Chlorophyll a-b binding protein, chloroplastic OS=...	[more]
CB21_PETSP	1.157e-57	79.70	Chlorophyll a-b binding protein 13, chloroplastic ...	[more]
CB21_PEA	1.159e-57	81.20	Chlorophyll a-b binding protein AB96 (Fragment) OS...	[more]
CB21_GOSHI	1.967e-57	80.15	Chlorophyll a-b binding protein 151, chloroplastic...	[more]
CB23_APIGR	3.343e-57	81.20	Chlorophyll a-b binding protein, chloroplastic OS=...	[more]
CB22_HORVU	3.343e-57	81.20	Chlorophyll a-b binding protein 2, chloroplastic O...	[more]
CB21_LEMGI	1.259e-56	78.20	Chlorophyll a-b binding protein of LHCII type I, c...	[more]
CB22_ARATH	1.641e-56	79.70	Chlorophyll a-b binding protein 2, chloroplastic O...	[more]

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Properties


Property Name	Value
Genbank description	USDA-FP_115000-073 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_H4 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417143 ID=CF417143; Name=CF417143; organism=Citrus sinensis; type=EST; length=617bp
ATGGCTCTCTCCTCATCATTCGTCGGCAAGGCTGTGAACCTTGCCCCTTC
AGGCAATGAGCTGAGCAATGGTGGCCGCATCTCCATGCGTAAAACCGGGA
GCAAGTCTGTTTCTTCAGGTAGCCCGTGGTACGGCCCGGACAGAGTCAAG
TACTTGGGTCCATTCTCTGGCGAGCCCCCAAGCTACTTGGACTGGTGAGT
TCCCTGGTGACTACGGTTGGGACACTGCTGGGCTTTCAGCTGACCCAGAA
ACCTTTGCCAAGAACCGTGAACTCGAAGTCATCCACTGCAGATGGGCCAT
GTTGGGAGCTCTTGGATGCGTCTTCCCGGAGCTCTTGGCCCGCAACGGAG
TCAAGTTCGGTGAGGCCGTGTGGTTCAAGGCGGGGGCCCAGATCTTCAGC
GAGGGCGGGCTTGACTACTTGGGGAACCCAAGCCTGATCCACGCTCAGAG
CATCTTGGCCATCTGGGCTTTGCCAGGTGGTCTTGGATGGGAGCCGTTGA
GGGTTACAGAATTGCTGGAGGGCCGCCTCGGTGAAGTGACTGACCCATTG
TACCCANGTGGCAGCTTTGATCCCATTGGGTTTGGCTGATGACCCGGAGG
CTTTTGCTGAGCTCAAG