CF417146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.119e-40 Identity = 65/118 (55.08%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 157 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + +++S N+ +L+G + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120 HSP 2 Score: 48.1358 bits (113), Expect = 2.119e-40 Identity = 25/51 (49.02%), Postives = 33/51 (64.71%), Query Frame = 2 Query: 500 LXNKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI 652 + NK DL + + V E +AFA E G+ FMETSAK + NVE+AF+ A I Sbjct: 117 IGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.601e-40 Identity = 66/120 (55.00%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 154 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQV 513 +YD+LFK++LIG++GVGK+CL+ RF + +TIGVDF I+TVE +G+ +KLQIWDTAGQERFR+IT SYYR A+ +I+ YD+T +ESF + +WL EI++YAS+ V +LVG ++ Sbjct: 5 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKI 124 HSP 2 Score: 41.2022 bits (95), Expect = 3.601e-40 Identity = 19/49 (38.78%), Postives = 32/49 (65.31%), Query Frame = 2 Query: 506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI 652 NK DL + VS + A+ F++ + ++ETSAK+S NVE+ F+ +A + Sbjct: 122 NKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 3.601e-40 Identity = 66/120 (55.00%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 154 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQV 513 +YD+LFK++LIG++GVGK+CL+ RF + +TIGVDF I+TVE +G+ +KLQIWDTAGQERFR+IT SYYR A+ +I+ YD+T +ESF + +WL EI++YAS+ V +LVG ++ Sbjct: 5 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKI 124 HSP 2 Score: 41.2022 bits (95), Expect = 3.601e-40 Identity = 19/49 (38.78%), Postives = 32/49 (65.31%), Query Frame = 2 Query: 506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI 652 NK DL + VS + A+ F++ + ++ETSAK+S NVE+ F+ +A + Sbjct: 122 NKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.601e-40 Identity = 66/120 (55.00%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 154 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQV 513 +YD+LFK++LIG++GVGK+CL+ RF + +TIGVDF I+TVE +G+ +KLQIWDTAGQERFR+IT SYYR A+ +I+ YD+T +ESF + +WL EI++YAS+ V +LVG ++ Sbjct: 5 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKI 124 HSP 2 Score: 41.2022 bits (95), Expect = 3.601e-40 Identity = 19/49 (38.78%), Postives = 32/49 (65.31%), Query Frame = 2 Query: 506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI 652 NK DL + VS + A+ F++ + ++ETSAK+S NVE+ F+ +A + Sbjct: 122 NKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.687e-40 Identity = 65/118 (55.08%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 157 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + +++S N+ +L+G + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120 HSP 2 Score: 46.9802 bits (110), Expect = 4.687e-40 Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 2 Query: 500 LXNKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI 652 + NK DL + + V E +AFA E G+ FMETSAK + NVE+A++ A I Sbjct: 117 IGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEI 167
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 6.107e-40 Identity = 65/119 (54.62%), Postives = 92/119 (77.31%), Query Frame = 1 Query: 154 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++ +GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV++WL E+ +A N+ ++ G + Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNK 126 HSP 2 Score: 41.9726 bits (97), Expect = 6.107e-40 Identity = 20/49 (40.82%), Postives = 31/49 (63.27%), Query Frame = 2 Query: 506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI 652 NK DL + VS E +A A++ G+ F+ETSA ++ N+E+AF + I Sbjct: 125 NKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEI 173
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 6.107e-40 Identity = 64/119 (53.78%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 154 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F +T + +GK +K QIWDTAGQER+R ITS+YYRGA G +++YDVT +F N +WL E+ + N+ +L+G + Sbjct: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNK 127 HSP 2 Score: 48.9062 bits (115), Expect = 6.107e-40 Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 2 Query: 500 LXNKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI 652 + NKCDL V E AKAFA+ + FMETSA D+TNVE AF + I Sbjct: 124 IGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQI 174
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 6.109e-40 Identity = 62/118 (52.54%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 157 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++++ N+ +L+G + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120 HSP 2 Score: 50.0618 bits (118), Expect = 6.109e-40 Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 2 Query: 500 LXNKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRM 664 + NK DL A + V E +AFA E G+ FMETSAK + NVE+AF+ A I ++ Sbjct: 117 IGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKI 171
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 6.109e-40 Identity = 62/118 (52.54%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 157 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++++ N+ +L+G + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120 HSP 2 Score: 50.0618 bits (118), Expect = 6.109e-40 Identity = 25/55 (45.45%), Postives = 37/55 (67.27%), Query Frame = 2 Query: 500 LXNKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRM 664 + NK DL + + V E +AFA E G+ FMETSAK ++NVE+AF+ A I +++ Sbjct: 117 IGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKI 171
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB2A_PONAB (Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 6.109e-40 Identity = 62/118 (52.54%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 157 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++++ N+ +L+G + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120 HSP 2 Score: 50.0618 bits (118), Expect = 6.109e-40 Identity = 25/55 (45.45%), Postives = 37/55 (67.27%), Query Frame = 2 Query: 500 LXNKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRM 664 + NK DL + + V E +AFA E G+ FMETSAK ++NVE+AF+ A I +++ Sbjct: 117 IGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKI 171 The following BLAST results are available for this feature:
BLAST of CF417146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417146 ID=CF417146; Name=CF417146; organism=Citrus sinensis; type=EST; length=679bpback to top |