CF417146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 6.463e-74 Identity = 107/122 (87.70%), Postives = 115/122 (94.26%), Query Frame = 1 Query: 145 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGI +VYDVTD +SFNNVKQWL EIDRYA++ VNKLLVG + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNK 122 HSP 2 Score: 72.7886 bits (177), Expect = 6.463e-74 Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 2 Query: 506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMAS 670 NK D+T K V Y AK FAD +GIPF+ETSAK+++NVEQAF+ MA IK+RM S Sbjct: 121 NKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGS 175
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 4.148e-73 Identity = 108/122 (88.52%), Postives = 115/122 (94.26%), Query Frame = 1 Query: 145 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT E +GKT+KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQ+SFNNVKQWL EIDRYA + VN+LLVG + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNK 122 HSP 2 Score: 71.2478 bits (173), Expect = 4.148e-73 Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 2 Query: 506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMAS 670 NK D+ K V Y AK FAD + IPF+ETSAKDSTNVEQAF+ M+ IK+RM + Sbjct: 121 NKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGN 175
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 5.904e-72 Identity = 105/122 (86.07%), Postives = 116/122 (95.08%), Query Frame = 1 Query: 145 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+YI+SYISTIGVDFKIRT+EQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYD T+ ESFNNVKQWL+EIDRYA+++V KLL+G + Sbjct: 1 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNK 122 HSP 2 Score: 73.1738 bits (178), Expect = 5.904e-72 Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 2 Query: 500 LXNKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQ 673 + NK D+ +K VS ET +A ADE+GIPF+ETSAKDS NVEQAF+ +A IK +M SQ Sbjct: 119 IGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQ 176
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 5.906e-72 Identity = 102/122 (83.61%), Postives = 114/122 (93.44%), Query Frame = 1 Query: 145 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 MNP+Y YLFKLLLIGDSGVGKSCLLLRFADD+Y ES+ISTIGVDFKIRT+E +GKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ +F NV+QWL EIDR+A +NVNKLLVG + Sbjct: 1 MNPDYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNK 122 HSP 2 Score: 77.7962 bits (190), Expect = 5.906e-72 Identity = 40/59 (67.80%), Postives = 46/59 (77.97%), Query Frame = 2 Query: 506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRM-ASQPS 679 NK DL A K V + TAKAFAD + IPF+ETSAK STNVEQAFM MA IK+R+ ASQP+ Sbjct: 121 NKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPT 179
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 8.402e-71 Identity = 104/122 (85.25%), Postives = 115/122 (94.26%), Query Frame = 1 Query: 145 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 M+ E+DYLFKLLLIGDS VGKSC LLRFADDSY++SYISTIGVDFKIRTVE +GKT+KLQIWDTAGQERFRTITSSYYRGAHGIIIVYD+TD ESFNNVKQWL+EIDRYA+D+V KLLVG + Sbjct: 1 MSNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNK 122 HSP 2 Score: 69.707 bits (169), Expect = 8.402e-71 Identity = 32/54 (59.26%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMA 667 NKCDL N+ V A+A+A E+GIPF+ETSAK+S NVE+AF+AM+A+IK A Sbjct: 121 NKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKA 174
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 1.096e-70 Identity = 104/122 (85.25%), Postives = 112/122 (91.80%), Query Frame = 1 Query: 145 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 MNP YD LFKLLLIGDSGVGKSCLLLRFADD Y ESYISTIGVDFKI+T+E DGKTIKLQIWDTAGQERF TITSSYYRGAHG ++VYDVTDQES+ NVKQWL EIDR+AS+NVNKLLVG + Sbjct: 1 MNPGYDCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNK 122 HSP 2 Score: 73.1738 bits (178), Expect = 1.096e-70 Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 2 Query: 506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRM 664 NK DLT K V TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK +M Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQM 173
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 3.170e-70 Identity = 104/122 (85.25%), Postives = 111/122 (90.98%), Query Frame = 1 Query: 145 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+ DGK IKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD SFNNVKQW+ EI RYA D+V +LLVG + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNK 122 HSP 2 Score: 69.3218 bits (168), Expect = 3.170e-70 Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 488 TNFWLXNKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 655 T + NKCDL K V TA+ +AD +GIPF+ETSAK S NVEQAFM MA+ IK Sbjct: 115 TRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIK 170
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 8.368e-68 Identity = 102/122 (83.61%), Postives = 110/122 (90.16%), Query Frame = 1 Query: 145 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 MN EYDYLFKLLLIG+SGVGKSCLLLRF+DD+Y YISTIGVDFKI+TVE DGKT+KLQIWDTAGQERFRTITSSYYRG+HGIIIVYDVTDQESFN VK WL EIDRYA+ V KLLVG + Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNK 122 HSP 2 Score: 67.0106 bits (162), Expect = 8.368e-68 Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQ 673 NKCDL + V Y+ AK FAD +PF+ETSA DSTNVE AF+ MA IK+ M+ Q Sbjct: 121 NKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQ 176
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 4.893e-65 Identity = 97/123 (78.86%), Postives = 112/123 (91.06%), Query Frame = 1 Query: 142 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 +M PE+D+ FK+LLIGDSGVGKSCLLLRFADDS+ +++ISTIGVDFKI+T+ DGKTIKLQIWDTAGQERFRTITSSYYRGA GII+VYD TDQ+SF NVKQW+ EIDRYA +NVNKLLVG + Sbjct: 2 SMAPEHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNK 124 HSP 2 Score: 63.1586 bits (152), Expect = 4.893e-65 Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 2 Query: 506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMA 667 NK DL K V AK+FA+ GIPF+ETSAK++TNVE+ F++MA IK+R+A Sbjct: 123 NKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLA 176
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.277e-59 Identity = 83/125 (66.40%), Postives = 110/125 (88.00%), Query Frame = 1 Query: 136 STTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGKQ 510 +T + YDYL KLLLIGDSGVGKSCLLLRF++DS+ S+I+TIG+DFKIRT+E +GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD++SF N++ W+ I+++A+D+VNK+L+G + Sbjct: 5 ATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNK 129 HSP 2 Score: 64.3142 bits (155), Expect = 1.277e-59 Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 2 Query: 500 LXNKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPS 679 + NKCD+ K V K+ ADE GI F+ETSAK+S NVE+AF+++A IK RM P+ Sbjct: 126 IGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPN 185 The following BLAST results are available for this feature:
BLAST of CF417146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417146 ID=CF417146; Name=CF417146; organism=Citrus sinensis; type=EST; length=679bpback to top |