CF417146

Overview
NameCF417146
Unique NameCF417146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RASZ_DICDI (Ras-like protein rasZ OS=Dictyostelium discoideum GN=rasZ PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 6.445e-17
Identity = 34/116 (29.31%), Postives = 64/116 (55.17%), Query Frame = 1
Query:  166 LFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-DNVNKLLVGKQ 510
            L +L ++GD GVGK+ + ++F  + ++  Y  TI   ++ + V  D +   L I DTAGQ+    +   + R   G ++VY +T + SF+ V+ +  +I R    D+V  +++G +
Sbjct:    9 LVRLCIMGDGGVGKTAVTIQFISNHFVYYYDPTIEDSYRKQCVIDD-QVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSITSRSSFDQVQFFREQIIRVLDRDDVPIMMIGNK 123          

HSP 2 Score: 43.8986 bits (102), Expect = 6.445e-17
Identity = 22/57 (38.60%), Postives = 31/57 (54.39%), Query Frame = 2
Query:  500 LXNKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMAS 670
            + NK DL   + V+Y+  K  A  +G+ FME SAK   N+E+ F     S+K R  S
Sbjct:  120 IGNKSDLDDERQVTYQEGKDLARCLGMSFMEVSAKSRANIEEVFNETVRSVKRREES 176          
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RASX_DICDI (Ras-like protein rasX OS=Dictyostelium discoideum GN=rasX PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.448e-17
Identity = 36/116 (31.03%), Postives = 65/116 (56.03%), Query Frame = 1
Query:  166 LFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SDNVNKLLVGKQ 510
            L KL ++GD GVGK+ + ++F  + ++  Y  TI   ++ + V  D +   L I DTAGQ+    +   + R   G ++VY VT + SF+ +  +  +I+R   SD+V  +++G +
Sbjct:    9 LVKLCIMGDGGVGKTAVTIQFISNHFVHYYDPTIEDSYRKQCVIDD-QVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSVTSRSSFDQIAFFKEQINRVLDSDDVPIMMIGNK 123          

HSP 2 Score: 39.6614 bits (91), Expect = 6.448e-17
Identity = 19/52 (36.54%), Postives = 28/52 (53.85%), Query Frame = 2
Query:  500 LXNKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 655
            + NK DL   + V+Y+  K  A   G+ FME SAK  +N+E+ F      +K
Sbjct:  120 IGNKSDLDDERQVTYQEGKDLARCFGMSFMEVSAKTRSNIEEVFNETVRCVK 171          
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAS1_NEUCR (Protein ras-1 OS=Neurospora crassa GN=ras-1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.448e-17
Identity = 34/115 (29.57%), Postives = 62/115 (53.91%), Query Frame = 1
Query:  169 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-DNVNKLLVGKQ 510
            +KL+++G  GVGKSCL ++     +++ Y  TI   ++ +    D +   L I DTAGQE +  +   Y R   G ++V+ +  +ESF  ++ +  +I R    D+   ++VG +
Sbjct:    9 YKLVVVGGGGVGKSCLTIQLIQGHFLDEYDPTIEDSYR-KQCTIDNEVALLDILDTAGQEEYSAMREQYMRTGEGFLLVFAINSRESFEEIRIYQQQILRVKDRDSFPMIIVGNK 122          

HSP 2 Score: 41.2022 bits (95), Expect = 6.448e-17
Identity = 21/50 (42.00%), Postives = 28/50 (56.00%), Query Frame = 2
Query:  506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 655
            NK DL   + VS +  +A A E G  ++ETSAK   NVE AF  +   I+
Sbjct:  121 NKYDLRGERVVSEQEGQALAAEFGTKYIETSAKTQHNVENAFYDLVREIR 170          
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RASM_HUMAN (Ras-related protein M-Ras OS=Homo sapiens GN=MRAS PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.451e-17
Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 1
Query:  169 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 450
            +KL+++GD GVGKS L ++F    ++  Y  TI  D  ++  E D +   L + DTAGQE F  +   Y R   G +IVY VTD+ SF +V ++
Sbjct:   14 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIE-DSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRF 106          

HSP 2 Score: 36.1946 bits (82), Expect = 6.451e-17
Identity = 20/54 (37.04%), Postives = 32/54 (59.26%), Query Frame = 2
Query:  506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKD-STNVEQAFMAMAASIKDRM 664
            NK DL   + ++ E  K  A +  IP++ETSAKD   NV++AF  +   I+ ++
Sbjct:  126 NKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIRQQI 179          
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAB24_HUMAN (Ras-related protein Rab-24 OS=Homo sapiens GN=RAB24 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.459e-17
Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 1
Query:  172 KLLLIGDSGVGKSCLLLRFADDSYIES-YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEI 462
            K++++G   VGK+ L+ R+  D ++   Y +TIG  F  + +    +T+ L IWDTAG ER+  ++  YYRGA   I+ YD+TD  SF   K W+ E+
Sbjct:    9 KVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKEL 106          

HSP 2 Score: 25.7942 bits (55), Expect = 6.459e-17
Identity = 11/38 (28.95%), Postives = 20/38 (52.63%), Query Frame = 2
Query:  530 KXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMA 643
            + V +   + +AD I     ETS+K   +V++ F  +A
Sbjct:  132 RRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKVA 169          
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RBL2A_HUMAN (Rab-like protein 2A OS=Homo sapiens GN=RABL2A PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17
Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query:  172 KLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRY 471
            K++ +GDS VGKS L+ RF  D +    +ST  +     T   DGKTI +  WDTAGQERF+++ +SYY  AH  I+V+D+  + ++ N+  W  E+  +
Sbjct:   23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREF 122          
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAS2_DROME (Ras-like protein 2 OS=Drosophila melanogaster GN=Ras64B PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 8.417e-17
Identity = 37/115 (32.17%), Postives = 59/115 (51.30%), Query Frame = 1
Query:  169 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-DNVNKLLVGKQ 510
            +KL+++G  GVGKS + ++F    ++  Y  TI  D   +    D    KL I DTAGQE F  +   Y R   G ++V+ + D  SF+ + ++  +I R    D    L+VG +
Sbjct:    6 YKLVVVGGGGVGKSAITIQFIQSYFVTDYDPTIE-DSYTKQCNIDDVPAKLDILDTAGQEEFSAMREQYMRSGEGFLLVFALNDHSSFDEIPKFQRQILRVKDRDEFPMLMVGNK 119          

HSP 2 Score: 40.817 bits (94), Expect = 8.417e-17
Identity = 23/58 (39.66%), Postives = 35/58 (60.34%), Query Frame = 2
Query:  506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI-KDRMASQP 676
            NKCDL   + VS E A+  +  + IP++E SAK   NV+QAF  +   + K ++A +P
Sbjct:  118 NKCDLKHQQQVSLEEAQNTSRNLMIPYIECSAKLRVNVDQAFHELVRIVRKFQIAERP 175          
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RASK_MONDO (GTPase KRas OS=Monodelphis domestica GN=KRAS PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.423e-17
Identity = 37/115 (32.17%), Postives = 66/115 (57.39%), Query Frame = 1
Query:  169 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SDNVNKLLVGKQ 510
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G + V+ + + +SF ++  +  +I R   S++V  +LVG +
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNK 117          

HSP 2 Score: 36.965 bits (84), Expect = 8.423e-17
Identity = 20/50 (40.00%), Postives = 28/50 (56.00%), Query Frame = 2
Query:  506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 655
            NKCDL + + V  + A+  A   GIPF+ETSAK     + AF  +   I+
Sbjct:  116 NKCDLPS-RTVDTKQAQDLARSYGIPFIETSAKTRQGGDDAFYTLVREIR 164          
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RRAS_HUMAN (Ras-related protein R-Ras OS=Homo sapiens GN=RRAS PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.089e-16
Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = 1
Query:  172 KLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-DNVNKLLVGKQ 510
            KL+++G  GVGKS L ++F    ++  Y  TI  D   +    DG   +L I DTAGQE F  +   Y R  HG ++V+ + D++SFN V +   +I R    D+   +LVG +
Sbjct:   31 KLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIE-DSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNK 143          

HSP 2 Score: 33.113 bits (74), Expect = 1.089e-16
Identity = 16/50 (32.00%), Postives = 26/50 (52.00%), Query Frame = 2
Query:  506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 655
            NK DL + + V    A AF     + + E SAK   NV++AF  +  +++
Sbjct:  142 NKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVR 191          
BLAST of CF417146 vs. ExPASy Swiss-Prot
Match: RAS_LENED (Ras-like protein OS=Lentinula edodes PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.089e-16
Identity = 33/111 (29.73%), Postives = 59/111 (53.15%), Query Frame = 1
Query:  169 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLV 501
            +KL+++G  GVGKS L ++F    +++ Y  TI   ++ + V  D   + L + DTAGQE +  +   Y R   G ++VY +T + SF  +  +  +I R    +   ++V
Sbjct:   11 YKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCVIDDEVAL-LDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISTFHQQILRVKDQDTFPVVV 120          

HSP 2 Score: 40.4318 bits (93), Expect = 1.089e-16
Identity = 20/50 (40.00%), Postives = 26/50 (52.00%), Query Frame = 2
Query:  506 NKCDLTANKXVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 655
            NKCDL   + V     +  A   G  F+ETSAK   NV+QAF  +   I+
Sbjct:  123 NKCDLEYERQVGMNEGRDLARHFGCKFVETSAKVRINVDQAFQDLVREIR 172          
The following BLAST results are available for this feature:
BLAST of CF417146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASZ_DICDI6.445e-1729.31Ras-like protein rasZ OS=Dictyostelium discoideum ... [more]
RASX_DICDI6.448e-1731.03Ras-like protein rasX OS=Dictyostelium discoideum ... [more]
RAS1_NEUCR6.448e-1729.57Protein ras-1 OS=Neurospora crassa GN=ras-1 PE=2 S... [more]
RASM_HUMAN6.451e-1739.36Ras-related protein M-Ras OS=Homo sapiens GN=MRAS ... [more]
RAB24_HUMAN6.459e-1738.78Ras-related protein Rab-24 OS=Homo sapiens GN=RAB2... [more]
RBL2A_HUMAN7.427e-1740.00Rab-like protein 2A OS=Homo sapiens GN=RABL2A PE=2... [more]
RAS2_DROME8.417e-1732.17Ras-like protein 2 OS=Drosophila melanogaster GN=R... [more]
RASK_MONDO8.423e-1732.17GTPase KRas OS=Monodelphis domestica GN=KRAS PE=1 ... [more]
RRAS_HUMAN1.089e-1635.96Ras-related protein R-Ras OS=Homo sapiens GN=RRAS ... [more]
RAS_LENED1.089e-1629.73Ras-like protein OS=Lentinula edodes PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-076 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_H8 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417146 ID=CF417146; Name=CF417146; organism=Citrus sinensis; type=EST; length=679bp
TTTTTTTTCTTTTTTGTCTTGTCTTCTGTTTTTGTTGACATTTAATTTCC
CGGCGAAACTCATATCACGAGATCTCGCCGAAGATAATAATCTGTTTTGG
TTAACCGAACCCGAAGCTTTTTTCTTTTACACAAATCTACGACGATGAAT
CCTGAATATGACTATCTGTTTAAGCTTCTGCTTATTGGAGATTCCGGTGT
TGGCAAATCTTGTCTTCTCTTGAGATTTGCTGATGATTCATATATTGAGA
GTTACATCAGCACCATAGGAGTTGATTTTAAAATACGCACTGTTGAGCAA
GATGGGAAGACCATTAAACTTCAAATTTGGGATACTGCTGGTCAAGAAAG
ATTTAGGACAATCACCAGCAGCTACTACCGTGGGGCACATGGTATCATAA
TTGTTTATGATGTGACAGACCAAGAGAGCTTCAATAATGTCAAGCAGTGG
TTGAATGAAATTGACCGTTATGCTAGTGATAATGTCAACAAACTTCTGGT
TGGNAAACAAGTGTGATCTCACTGCAAATAAGGNTGTCTCGTACGAAACA
GCCAAGGCATTTGCAGATGAAATTGGAATACCTTTCATGGAAACTAGTGC
AAAAGATTCTACCAACGTGGAACAGGCATTCATGGCCATGGCTGCTTCAA
TCAAGGATAGAATGGCAAGTCAACCATCC
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