CF417147 | Citrus Genome Database

Overview


Name	CF417147
Unique Name	CF417147
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	694

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_HUMAN (Ubiquitin OS=Homo sapiens GN=RPS27A PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 2.243e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.243e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_HORSE (Ubiquitin OS=Equus caballus GN=UBB PE=3 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 2.243e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.243e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_GORGO (Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 2.243e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.243e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_FELCA (Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 2.243e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.243e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_DROME (Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 2.243e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.243e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_CRIGR (Ubiquitin OS=Cricetulus griseus PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 2.243e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.243e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_CHICK (Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 2.243e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.243e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_CERCA (Ubiquitin OS=Ceratitis capitata PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 2.243e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.243e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_CAVPO (Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 2.243e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.243e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_CANFA (Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 2.243e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.243e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

The following BLAST results are available for this feature:

BLAST of CF417147 vs. ExPASy Swiss-Prot

BLAST of CF417147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92


Match Name	E-value	Identity	Description
UBIQ_HUMAN	6.982e-34	96.00	Ubiquitin OS=Homo sapiens GN=RPS27A PE=1 SV=1	[more]
UBIQ_HORSE	6.982e-34	96.00	Ubiquitin OS=Equus caballus GN=UBB PE=3 SV=2	[more]
UBIQ_GORGO	6.982e-34	96.00	Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 S...	[more]
UBIQ_FELCA	6.982e-34	96.00	Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1	[more]
UBIQ_DROME	6.982e-34	96.00	Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1...	[more]
UBIQ_CRIGR	6.982e-34	96.00	Ubiquitin OS=Cricetulus griseus PE=3 SV=1	[more]
UBIQ_CHICK	6.982e-34	96.00	Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1	[more]
UBIQ_CERCA	6.982e-34	96.00	Ubiquitin OS=Ceratitis capitata PE=1 SV=1	[more]
UBIQ_CAVPO	6.982e-34	96.00	Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1	[more]
UBIQ_CANFA	6.982e-34	96.00	Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_115000-077 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_H10 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417147 ID=CF417147; Name=CF417147; organism=Citrus sinensis; type=EST; length=694bp
CAGATTTTTGTGAAAACCCTGACTGGTAAGACTATAACTTTGGAGGTTGA
AAGCTCTGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGG
GCATCCCACCTGATCAACAGAGGTTAATCTTTGCCGGCAAACAACTTGAA
GATGGTCGTACTCTTGCTGACTACAACATCCAGAAGGAGTCAACCCTCCA
TTTGGTGCTTCGTCTCCGTGGTGGCATGCAGATCTTTGTGAAAACCCTCA
CCGGAAAAACAATTACTCTTGGAGGTTGAAAGTTCTGACACCATCGACAA
CGTGAAAGCAAAAATTCAAGACAAGGAGGGTATCCCACCAGATCAGCAGA
GGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGGACTCTTGCAGA
CTATAACATCCAGAAAGAATCCACTCTTCACTTGGTTCTTCGCCTCCGTG
GTGGTATGCAGATTTTTGTGAAGACACTCACTGGGAAAACCATCCACATT
GGAGGTTGAGAGTTCGGACACAATTGACAATGTGAAGGCTAAGATCCAGN
GATAANGGAGGGGGATTCCCCCAGACCAGCCAGAAGGTTGATCTTTGCTG
GAAAACAACTTGGAGGATGGAAGGACTCTTGCTGATTACAACATCCAGAA
GGAGTCCACTCTGCATCTTGTGCTCCGTCCTCCCGTGGGAGGTT