CF417147 | Citrus Genome Database

Overview


Name	CF417147
Unique Name	CF417147
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	694

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 2.243e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.243e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 2.243e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.243e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.119e-34
Identity = 71/75 (94.67%), Postives = 75/75 (100.00%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 80.1073 bits (196), Expect = 2.919e-22
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + L+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 2.919e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 79.7221 bits (195), Expect = 1.617e-14
Identity = 45/65 (69.23%), Postives = 50/65 (76.92%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TL+VE+SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLDVEASDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.191e-33
Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 2 Score: 80.4925 bits (197), Expect = 3.798e-22
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.0542 bits (105), Expect = 3.798e-22
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLR+RGG
Sbjct:   55 TLSDYNIQKESTLHLVLRMRGG 76

HSP 4 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.556e-33
Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 79.337 bits (194), Expect = 4.943e-22
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + L+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 4.943e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 78.9518 bits (193), Expect = 2.758e-14
Identity = 45/65 (69.23%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TL+VE SDTI+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLDVEPSDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.032e-33
Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 79.7221 bits (195), Expect = 1.724e-22
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GR
Sbjct:   11 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR 54

HSP 3 Score: 46.9802 bits (110), Expect = 1.724e-22
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TLADYNIQKESTLHLVLRLRGG
Sbjct:   55 TLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 78.5666 bits (192), Expect = 3.603e-14
Identity = 45/65 (69.23%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK   LEVE+SDTI+NVKAKIQ    GIPPDQ +        LE+GRTLADYNIQKESTLHLVLR
Sbjct:   10 GKTIALEVEASDTIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.032e-33
Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 78.9518 bits (193), Expect = 6.432e-22
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 6.432e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 78.5666 bits (192), Expect = 3.603e-14
Identity = 45/65 (69.23%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SD+I+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDSIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.032e-33
Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 78.9518 bits (193), Expect = 6.432e-22
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 6.432e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 78.5666 bits (192), Expect = 3.603e-14
Identity = 45/65 (69.23%), Postives = 49/65 (75.38%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SD+I+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEPSDSIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.032e-33
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 78.9518 bits (193), Expect = 6.432e-22
Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 6.432e-22
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 78.5666 bits (192), Expect = 3.603e-14
Identity = 45/65 (69.23%), Postives = 48/65 (73.85%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVE SD I+NVKAKIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVEGSDNIENVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.911e-33
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 77.411 bits (189), Expect = 1.844e-21
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + L+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 45.8246 bits (107), Expect = 1.844e-21
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TL+DYNIQKESTLHLVLRLRGG
Sbjct:   55 TLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 77.0258 bits (188), Expect = 1.048e-13
Identity = 44/65 (67.69%), Postives = 48/65 (73.85%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TL+VE SD+IDNVK KIQ    GIPPDQ +        LEDGRTL+DYNIQKESTLHLVLR
Sbjct:   10 GKTITLDVEPSDSIDNVKQKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

The following BLAST results are available for this feature:

BLAST of CF417147 vs. ExPASy Swiss-Prot

BLAST of CF417147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92


Match Name	E-value	Identity	Description
UBIQ_CAMDR	6.982e-34	96.00	Ubiquitin OS=Camelus dromedarius PE=3 SV=2	[more]
UBIQ_BOVIN	6.982e-34	96.00	Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1	[more]
UBIQ_TETPY	9.119e-34	94.67	Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ...	[more]
UBIQ_SHEEP	1.191e-33	94.67	Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2	[more]
UBIQ_EIMBO	1.556e-33	94.67	Ubiquitin OS=Eimeria bovis PE=2 SV=1	[more]
UBIQ_TRYBB	2.032e-33	94.67	Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1	[more]
UBIQ_STRPU	2.032e-33	94.67	Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV...	[more]
UBIQ_ENCCU	2.032e-33	94.67	Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074...	[more]
UBIQ_DICDI	2.032e-33	94.67	Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1...	[more]
UBIQ_PHYIN	5.911e-33	93.33	Ubiquitin OS=Phytophthora infestans PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_115000-077 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_H10 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417147 ID=CF417147; Name=CF417147; organism=Citrus sinensis; type=EST; length=694bp
CAGATTTTTGTGAAAACCCTGACTGGTAAGACTATAACTTTGGAGGTTGA
AAGCTCTGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGG
GCATCCCACCTGATCAACAGAGGTTAATCTTTGCCGGCAAACAACTTGAA
GATGGTCGTACTCTTGCTGACTACAACATCCAGAAGGAGTCAACCCTCCA
TTTGGTGCTTCGTCTCCGTGGTGGCATGCAGATCTTTGTGAAAACCCTCA
CCGGAAAAACAATTACTCTTGGAGGTTGAAAGTTCTGACACCATCGACAA
CGTGAAAGCAAAAATTCAAGACAAGGAGGGTATCCCACCAGATCAGCAGA
GGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGGACTCTTGCAGA
CTATAACATCCAGAAAGAATCCACTCTTCACTTGGTTCTTCGCCTCCGTG
GTGGTATGCAGATTTTTGTGAAGACACTCACTGGGAAAACCATCCACATT
GGAGGTTGAGAGTTCGGACACAATTGACAATGTGAAGGCTAAGATCCAGN
GATAANGGAGGGGGATTCCCCCAGACCAGCCAGAAGGTTGATCTTTGCTG
GAAAACAACTTGGAGGATGGAAGGACTCTTGCTGATTACAACATCCAGAA
GGAGTCCACTCTGCATCTTGTGCTCCGTCCTCCCGTGGGAGGTT