CF417151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.340e-35 Identity = 83/160 (51.88%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGSSDPSARAGLTTWETQA*STPRASWPSGLCQVVLDGS 552 F G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNR + +G+ P L + AVW + GS S GL + ++ CQVVL G+ Sbjct: 13 FAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGSQIFS-EGGLDYLGNPSLVHAQSILAIWACQVVLMGA 170 HSP 2 Score: 88.1965 bits (217), Expect = 4.102e-17 Identity = 49/78 (62.82%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA L + IAG LGEV DPLYPGGSFDP+G+ Sbjct: 124 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL-MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 199
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.697e-35 Identity = 83/162 (51.23%), Postives = 102/162 (62.96%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGSSDPSARAGLTTWETQA*STPRASWPSGLCQVVLDGS 552 F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNR + +G+ P L + AVW + GS S GL + ++ CQVVL G+ Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGSQIFS-EGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 87.8113 bits (216), Expect = 5.357e-17 Identity = 48/78 (61.54%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA L + +AG LGEV DPLYPGGSFDP+G+ Sbjct: 126 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL-MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL 201
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34 Identity = 74/126 (58.73%), Postives = 88/126 (69.84%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGS 444 F GK V L+PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNR + +G+ P L + AVW++ GS Sbjct: 13 FAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP-ELFARNGVKFGEAVWLKAGS 137 HSP 2 Score: 84.7297 bits (208), Expect = 4.535e-16 Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA L + +AG LG V DPLYPGGSFDP+G+ Sbjct: 126 KFGEA-VWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ-VLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGL 201
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.299e-34 Identity = 83/162 (51.23%), Postives = 99/162 (61.11%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGSSDPSARAGLTTWETQA*STPRASWPSGLCQVVLDGS 552 F G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNR + +G+ P L + AVW + GS S GL + ++ CQVVL G+ Sbjct: 13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGSQIFS-EGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 90.1225 bits (222), Expect = 1.079e-17 Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA L + +AG LGEVTDPLYPGGSFDP+G+ Sbjct: 126 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL-MGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGL 201
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 85/158 (53.80%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 79 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALG-------PQRSPSSVRAVWVQGGS-----------SDPS---ARAGLTTWETQ 489 GKAV +APS +EL GR+SMRKT VS SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNR ++ + S W L GALG + AVW + GS +PS A++ L+ W TQ Sbjct: 15 GKAVKVAPSSSELFGNGRVSMRKTVKAPVSD-SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNR-------ELEVIHSRWAML-GALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQ 163 HSP 2 Score: 85.8853 bits (211), Expect = 2.036e-16 Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSIL+IWA L + +AG LGE+ DPLYPGGSFDP+G+ Sbjct: 123 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVIL-MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGL 198
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 82/162 (50.62%), Postives = 99/162 (61.11%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGSSDPSARAGLTTWETQA*STPRASWPSGLCQVVLDGS 552 F GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNR + +G+ P L + AVW + GS S GL + ++ CQVVL G+ Sbjct: 13 FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGSQIFS-EGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 87.8113 bits (216), Expect = 5.357e-17 Identity = 48/78 (61.54%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA L + +AG LGEV DPLYPGGSFDP+G+ Sbjct: 126 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL-MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL 201
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 78/153 (50.98%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGS-----------SDPS---ARAGLTTWETQ 489 F GKAV L+P +E+ GR++MRKT + SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NR + +G+ P L + AVW + GS +PS A++ L W TQ Sbjct: 13 FAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQ 164 HSP 2 Score: 77.7962 bits (190), Expect = 5.543e-14 Identity = 45/84 (53.57%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXR------LGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA + + + + G R LGE D LYPGGSFDP+G+ Sbjct: 124 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAT------QVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGL 200
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.393e-33 Identity = 83/161 (51.55%), Postives = 99/161 (61.49%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALG-------PQRSPSSVRAVWVQGGS-----------SDPS---ARAGLTTWETQ 489 F GKAVNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NR ++ + S W L GALG + AVW + GS +PS A++ L W TQ Sbjct: 13 FAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNR-------ELEVIHSRWAML-GALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 165 HSP 2 Score: 77.0258 bits (188), Expect = 9.456e-14 Identity = 47/82 (57.32%), Postives = 54/82 (65.85%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FS+GGLDYLGNPSL+HAQSILAIWA L G + E RV LGE D LYPGGSFDP+G+ Sbjct: 125 KFGEA-VWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAV--EGYRVA--GNGPLGEAEDLLYPGGSFDPLGL 201
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 83/162 (51.23%), Postives = 101/162 (62.35%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGSSDPSARAGLTTWETQA*STPRASWPSGLCQVVLDGS 552 F GKAVN+ PS ++++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNR + +G+ P L + AVW + GS S GL + ++ CQVVL G+ Sbjct: 13 FAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP-ELFARNGVKFGEAVWFKAGSQIFS-EGGLDYLGNPSLVHAQSILAIWACQVVLMGA 171 HSP 2 Score: 87.4261 bits (215), Expect = 6.996e-17 Identity = 48/78 (61.54%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA L + +AG LGEV DPLYPGGSFDP+G+ Sbjct: 125 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL-MGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGL 200
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 69/89 (77.53%), Postives = 74/89 (83.15%), Query Frame = 1 Query: 127 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALG 393 GR+SMRKT SK+VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR ++ + S W L GALG Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR-------ELEVIHSRWAML-GALG 91 HSP 2 Score: 73.1738 bits (178), Expect = 1.365e-12 Identity = 53/110 (48.18%), Postives = 57/110 (51.82%), Query Frame = 2 Query: 326 LEVIHCRWAMLGALGCVFPELLARNGVQVR*GPCGFKAGAQILQRGRA*LLGKPKLDPRPEHLGHLGFARWSWMGAVEGYRNCWXAXR*SD*PIVPRWQL*SHWGLADDP 655 LEVIH RWAMLGALGCVFPELLARNGV+ FKAG+QI G LG L L + + MGAVEGYR PI P LADDP Sbjct: 77 LEVIHSRWAMLGALGCVFPELLARNGVKFG-EASWFKAGSQIFSEGGLDYLGNQSLIHAQSILA-IWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSF-DPLALADDP 183 The following BLAST results are available for this feature:
BLAST of CF417151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417151 ID=CF417151; Name=CF417151; organism=Citrus sinensis; type=EST; length=656bpback to top |