CF417153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA2_MAIZE (Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 63/113 (55.75%), Postives = 71/113 (62.83%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 RDPFR+G NILVMCD Y P GEPIP+NKRH AAKIFSH DV AEEPW L ++ PLGW L++ K +GRDIVD YKACLYAGI+ISG Sbjct: 79 RDPFRKGQNILVMCDCYEPNGEPIPSNKRHGAAKIFSHPDVKAEEPWFGIEQEYTLL-QKDTKWPLGWP---LAYPGPQGPYYCAAGADKSYGRDIVDCAYKACLYAGIDISG 187 HSP 2 Score: 102.064 bits (253), Expect = 3.094e-21 Identity = 59/121 (48.76%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 T KIIAEYIW+GGSGMD+RSKARTL GPV DPSKLPKWN+DGSSTGQAPG+D + F+ I ++C E K + + + + +GIEQEYTLL Sbjct: 16 TGKIIAEYIWVGGSGMDVRSKARTLSGPVDDPSKLPKWNFDGSSTGQAPGDDSEVILCPRAIFRDPFRKGQNILVMCDCYEPNGE-PIPSNKRHGAAKIFSHPDVKAEEPWFGIEQEYTLL 135
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA2_DROME (Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.059e-25 Identity = 50/115 (43.48%), Postives = 59/115 (51.30%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGI--HLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFRRGNNILVMCD Y G P TNKR ++ + AEEPW GI T PLGW + K + RDIVD+HY+ACLYAGI +SG Sbjct: 92 KDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEV--ANKCAAEEPWF----GIEQEYTFLDFDGHPLGWPKN--GFPGPQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVSG 198 HSP 2 Score: 54.6842 bits (130), Expect = 1.059e-25 Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 1 Query: 187 AEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED 327 A Y+WI G+G D+R K RTL P +LP WNYDGSS QA G + Sbjct: 34 ATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSSCYQAEGSN 80
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA3_HORVU (Glutamine synthetase OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25 Identity = 61/113 (53.98%), Postives = 71/113 (62.83%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR GNNILVMCD YTP GEPIPTNKR+ AAKI S+ DV EEPW L ++ +N PLGW + K +GRDIVDSHYKACL+ G+NISG Sbjct: 79 KDPFREGNNILVMCDCYTPRGEPIPTNKRYNAAKILSNPDVAKEEPWYGIEQEYTLL-QKDINWPLGWPVG--GFPGPQGPYYCGIGADKSFGRDIVDSHYKACLFGGVNISG 188 HSP 2 Score: 107.842 bits (268), Expect = 5.639e-23 Identity = 62/121 (51.24%), Postives = 73/121 (60.33%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 T+KIIAEYIWIGGSGMD+RSKAR LPGPV+ PSKLPKWNYDGSSTGQAPGED + + I ++C T R K + + + + YGIEQEYTLL Sbjct: 16 TEKIIAEYIWIGGSGMDLRSKARHLPGPVTHPSKLPKWNYDGSSTGQAPGEDSEVILYPQAILKDPFREGNNILVMCDCYT-PRGEPIPTNKRYNAAKILSNPDVAKEEPWYGIEQEYTLL 135
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_LACSA (Glutamine synthetase OS=Lactuca sativa PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25 Identity = 63/113 (55.75%), Postives = 73/113 (64.60%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFRRGN+ILVMCDAYTPAGEPIPTNKR AAAKIFS+ +V E W L ++ N PLGW + K +GRDIVD+HYKACLYAG+NISG Sbjct: 79 KDPFRRGNHILVMCDAYTPAGEPIPTNKRAAAAKIFSNPEVEKEVTWYGIEQEYTLL-QKDTNWPLGWPLG--GFPGPQGPYYCGIGADKAFGRDIVDAHYKACLYAGVNISG 188 HSP 2 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 65/121 (53.72%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 TDKIIAEYIWIGGSGMD+RSKARTL GPVSDPS+LPKWNYDGSSTGQAPGED + F+ I ++C T E K + + + + YGIEQEYTLL Sbjct: 16 TDKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSELPKWNYDGSSTGQAPGEDSEVIIYPQAIFKDPFRRGNHILVMCDAYTPAGE-PIPTNKRAAAAKIFSNPEVEKEVTWYGIEQEYTLL 135
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA4_PHAVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25 Identity = 61/113 (53.98%), Postives = 73/113 (64.60%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR GNNILV+CDAYTPAGEPIPTNKRH AA++FS+ V+AE PW L + +N PLGW + K +GRDI D+HYKACL+AGINISG Sbjct: 136 KDPFRGGNNILVICDAYTPAGEPIPTNKRHRAAEVFSNPRVIAEVPWFGIEQEYTLL-QTNVNWPLGWPVG--GYPGPQGPYYCSAGADKSFGRDISDAHYKACLFAGINISG 245 HSP 2 Score: 102.834 bits (255), Expect = 1.814e-21 Identity = 61/126 (48.41%), Postives = 76/126 (60.32%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRE-----NQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 TDKIIAEYIWIGG+G+D+RSK+RT+ PV PS+LPKWNYDGSSTGQAPGED + F+ G I ++C T E + + + PR A + W +GIEQEYTLL Sbjct: 73 TDKIIAEYIWIGGTGIDVRSKSRTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPAGEPIPTNKRHRAAEVFSNPRVIAEVP-W-----FGIEQEYTLL 192
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_CANGA (Glutamine synthetase OS=Candida glabrata GN=GLN1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.147e-25 Identity = 42/116 (36.21%), Postives = 59/116 (50.86%), Query Frame = 3 Query: 357 FSRDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 F DPFRRG+NI V+ + + G P N RH A K+F +H D EE +W+ T M + W + + K + RD++++HY+ACLYAGINISG Sbjct: 81 FYPDPFRRGDNITVLAECFNSDGTPNKFNHRHEANKLFQAHKD---EE--IWFGIEQEYTLFDMYDNVYAWPKG--GYPAPQGPYYCGVGAGKVYARDVIEAHYRACLYAGINISG 189 HSP 2 Score: 65.855 bits (159), Expect = 5.147e-25 Identity = 29/50 (58.00%), Postives = 40/50 (80.00%), Query Frame = 1 Query: 178 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED 327 K+IAEY+W+ G+G ++RSKARTL ++ +LP+WN+DGSST QAPG D Sbjct: 23 KVIAEYVWVDGTG-NLRSKARTLNKVITSIEQLPEWNFDGSSTNQAPGYD 71
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA2_ORYSJ (Glutamine synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=GLN2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.025e-25 Identity = 61/113 (53.98%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR GNNILVMCD YTPAGEPIPTNKR+ AA++FS VV++ PW L +R +N PLGW + K +GRDI D+HYKACLYAGINISG Sbjct: 135 KDPFRGGNNILVMCDTYTPAGEPIPTNKRNRAAQVFSDPKVVSQVPWFGIEQEYTLL-QRDVNWPLGWPVG--GYPGPQGPYYCAVGSDKSFGRDISDAHYKACLYAGINISG 244 HSP 2 Score: 105.145 bits (261), Expect = 3.655e-22 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 TDKIIAEYIW+GG+G+D+RSK+RT+ PV DPS+LPKWNYDGSSTGQAPGED + F+ G I ++C T E ++ FS ++ + +GIEQEYTLL Sbjct: 72 TDKIIAEYIWVGGTGIDLRSKSRTISKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVMCDTYTPAGEPIPTNKRNRAAQVFSDPKVV-SQVPWFGIEQEYTLL 191
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLN15_ARATH (Glutamine synthetase cytosolic isozyme 1-5 OS=Arabidopsis thaliana GN=GLN1-5 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.869e-25 Identity = 58/113 (51.33%), Postives = 71/113 (62.83%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR+GNNILVMCDAY PAG+PIPTN RH A KIF H +V AEEPW L ++ + PLGW + K +GRDIVD+HYKACLY+G++I G Sbjct: 79 KDPFRKGNNILVMCDAYRPAGDPIPTNNRHKAVKIFDHPNVKAEEPWFGIEQEYTLL-KKDVKWPLGWPLG--GFPGPQGPYYCAVGADKAFGRDIVDAHYKACLYSGLSIGG 188 HSP 2 Score: 103.99 bits (258), Expect = 8.143e-22 Identity = 61/126 (48.41%), Postives = 74/126 (58.73%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVML-----TLLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 T KIIAEYIWIGGSGMD+RSKARTLPGPVS+P+KLPKWNYDGSST QA G+D + F+ I ++C + N+ + K P A + +GIEQEYTLL Sbjct: 16 TKKIIAEYIWIGGSGMDIRSKARTLPGPVSNPTKLPKWNYDGSSTDQAAGDDSEVILYPQAIFKDPFRKGNNILVMCDAYRPAGDPIPTNNRHKAVKIFDHPNVKA------EEPWFGIEQEYTLL 135
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_YEAST (Glutamine synthetase OS=Saccharomyces cerevisiae GN=GLN1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 8.719e-25 Identity = 42/113 (37.17%), Postives = 59/113 (52.21%), Query Frame = 3 Query: 366 DPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 DPFRRG+NI+V+ Y G P N RH AAK+F +H D EE +W+ T M + GW + + K + RD++++HY+ACLYAG+ ISG Sbjct: 84 DPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHKD---EE--IWFGLEQEYTLFDMYDDVYGWPKG--GYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISG 189 HSP 2 Score: 65.0846 bits (157), Expect = 8.719e-25 Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 1 Query: 178 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED 327 +IIAEY+WI G+G ++RSK RTL ++ +LP+WN+DGSST QAPG D Sbjct: 23 RIIAEYVWIDGTG-NLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHD 71
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNAC_BRANA (Glutamine synthetase, chloroplastic OS=Brassica napus GN=GLN2 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24 Identity = 62/113 (54.87%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 RDPFR GNNILV+CD YTPAGEPIPTNKR AA+IFS+ V E PW L + +N PLGW ++ K WGRDI D+HYKACLYAGINISG Sbjct: 135 RDPFRGGNNILVICDTYTPAGEPIPTNKRARAAEIFSNKKVNEEIPWFGIEQEYTLL-QPNVNWPLGWPVG--AYPGPQGPYYCGVGAEKSWGRDISDAHYKACLYAGINISG 244 HSP 2 Score: 105.145 bits (261), Expect = 3.655e-22 Identity = 60/121 (49.59%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 TD+IIAEYIWIGGSG+D+RSK+RTL PV DPS+LPKWNYDGSSTGQAPGED + F+ G I ++C T E K + + + + +GIEQEYTLL Sbjct: 72 TDRIIAEYIWIGGSGIDLRSKSRTLEKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTYTPAGE-PIPTNKRARAAEIFSNKKVNEEIPWFGIEQEYTLL 191 The following BLAST results are available for this feature:
BLAST of CF417153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417153 ID=CF417153; Name=CF417153; organism=Citrus sinensis; type=EST; length=701bpback to top |