CF417153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA2_PEA (Glutamine synthetase leaf isozyme, chloroplastic OS=Pisum sativum GN=GS2 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 61/113 (53.98%), Postives = 71/113 (62.83%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR GNNILV+CDAYTPAGEPIPTNKRH AA+IFS+ V AE PW L + + PLGW + K +GRDI D+HYKAC+YAGINISG Sbjct: 137 KDPFRGGNNILVVCDAYTPAGEPIPTNKRHRAAEIFSNPKVEAEIPWYGIEQEYTLL-QTNVKWPLGWPVG--GYPGPQGPYYCAAGADKSFGRDISDAHYKACIYAGINISG 246 HSP 2 Score: 102.449 bits (254), Expect = 2.369e-21 Identity = 60/126 (47.62%), Postives = 76/126 (60.32%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRE-----NQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 TD IIAEYIWIGG+G+D+RSK+RT+ PVS PS++PKWNYDGSSTGQAPGED + F+ G I ++C T E + + + P+ A + W YGIEQEYTLL Sbjct: 74 TDSIIAEYIWIGGTGIDVRSKSRTISKPVSHPSEVPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVVCDAYTPAGEPIPTNKRHRAAEIFSNPKVEAEIP-W-----YGIEQEYTLL 193
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA2_DAUCA (Glutamine synthetase, chloroplastic OS=Daucus carota GN=GLN2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 60/113 (53.10%), Postives = 71/113 (62.83%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR GNNILV+CD YTP GEPIPTNKRH AA+IFS + V+ E PW L ++ +N PLGW + K +GRDI D+HYKACLYAGINISG Sbjct: 139 KDPFRGGNNILVICDTYTPQGEPIPTNKRHKAAQIFSDAKVLGEVPWFGIEQEYTLM-QQDVNWPLGWNVG--GYPGPQGPYYCAAGADKSFGRDISDAHYKACLYAGINISG 248 HSP 2 Score: 101.679 bits (252), Expect = 4.041e-21 Identity = 58/123 (47.15%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLLAE 540 TDKIIAEYIWIGG+G+D+RSK+RT+ PV PS+LPKWNYDGSSTGQAPG+D + F+ G I ++C T E + FS +L + +GIEQEYTL+ + Sbjct: 76 TDKIIAEYIWIGGTGIDVRSKSRTISKPVEHPSELPKWNYDGSSTGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDTYTPQGEPIPTNKRHKAAQIFSDAKVLG-EVPWFGIEQEYTLMQQ 197
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_KLULA (Glutamine synthetase OS=Kluyveromyces lactis GN=GLN1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.255e-24 Identity = 40/116 (34.48%), Postives = 59/116 (50.86%), Query Frame = 3 Query: 357 FSRDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 F DPFRRG+NI+V+ + + G P N RH AAK+F +H D +W+ T + GW + + K + RD++++HY+ACLYAG+NISG Sbjct: 83 FYPDPFRRGDNIVVLAECWNNDGTPNKFNHRHEAAKLFEAHKDAE-----MWFGLEQEYTLFDQYDQVYGWPKG--GFPAPQGPYYCGVGAGKVFARDVIEAHYRACLYAGVNISG 191 HSP 2 Score: 63.5438 bits (153), Expect = 3.255e-24 Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 1 Query: 181 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED 327 IIAEY+WI G +RSK RTL V+ LP+WN+DGSSTGQAPG D Sbjct: 26 IIAEYVWIDSEG-GLRSKGRTLNKKVTSVDSLPEWNFDGSSTGQAPGHD 73
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA2_MEDSA (Glutamine synthetase leaf isozyme, chloroplastic OS=Medicago sativa GN=GS2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 61/113 (53.98%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR GNNILV+CDAYTP GEPIPTNKRH AA+IFS+ V AE PW L + + PLGW + K +GRDI D+HYKACLYAGINISG Sbjct: 135 KDPFRGGNNILVICDAYTPQGEPIPTNKRHKAAEIFSNPKVEAEIPWYGIEQEYTLL-QTDVKWPLGWPVG--GYPGPQGPYYCAAGADKSFGRDISDAHYKACLYAGINISG 244 HSP 2 Score: 102.064 bits (253), Expect = 3.094e-21 Identity = 59/126 (46.83%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLT-----LLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 TD IIAEYIWIGG+G+D+RSK+RT+ PV PS+LPKWNYDGSSTGQAPGED + F+ G I ++C T + + + + P+ A + W YGIEQEYTLL Sbjct: 72 TDSIIAEYIWIGGTGIDVRSKSRTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPQGEPIPTNKRHKAAEIFSNPKVEAEIP-W-----YGIEQEYTLL 191
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA2_ARATH (Glutamine synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GLN2 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 60/113 (53.10%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 RDPFR GNNILV+CD +TPAGEPIPTNKR AA+IFS+ V E PW L ++ + PLGW ++ K WGRDI D+HYKACLYAGINISG Sbjct: 137 RDPFRGGNNILVICDTWTPAGEPIPTNKRAKAAEIFSNKKVSGEVPWFGIEQEYTLL-QQNVKWPLGWPVG--AFPGPQGPYYCGVGADKIWGRDISDAHYKACLYAGINISG 246 HSP 2 Score: 103.219 bits (256), Expect = 1.389e-21 Identity = 59/127 (46.46%), Postives = 79/127 (62.20%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRE----NQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLLAE 540 +D+IIAEYIWIGGSG+D+RSK+RT+ PV DPS+LPKWNYDGSSTGQAPGED + F+ G I ++C T E N+ + ++ + + + W +GIEQEYTLL + Sbjct: 74 SDRIIAEYIWIGGSGIDLRSKSRTIEKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTWTPAGEPIPTNKRAKAAEIFSNKKVSGEVPW-----FGIEQEYTLLQQ 195
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA2_HORVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Hordeum vulgare PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 59/113 (52.21%), Postives = 69/113 (61.06%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR GNNILV+CD YTP GEPIPTNKRH AA+IFS V ++ PW L +R +N PLGW + K +GRDI D+HYKACLYAGI ISG Sbjct: 141 KDPFRGGNNILVICDTYTPQGEPIPTNKRHMAAQIFSDPKVTSQVPWFGIEQEYTLM-QRDVNWPLGWPVG--GYPGPQGPYYCAVGSDKSFGRDISDAHYKACLYAGIEISG 250 HSP 2 Score: 106.301 bits (264), Expect = 1.641e-22 Identity = 61/125 (48.80%), Postives = 75/125 (60.00%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLPRFS----AILMLWLKNHGYGIEQEYTLL 534 TDKIIAEYIW+GGSG+D+RSK+RT+ PV DPS+LPKWNYDGSSTGQAPGED + F+ G I ++C T E + M FS + W +GIEQEYTL+ Sbjct: 78 TDKIIAEYIWVGGSGIDLRSKSRTISKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPQGEPIPTNKRHMAAQIFSDPKVTSQVPW-----FGIEQEYTLM 197
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNAC_MAIZE (Glutamine synthetase, chloroplastic OS=Zea mays GN=GLN2 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.639e-23 Identity = 57/113 (50.44%), Postives = 69/113 (61.06%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR GNN+LV+CD YTP GEP+PTNKRH AA+IFS V + PW L ++ +N PLGW + K +GRDI D+HYKACLYAGINISG Sbjct: 130 KDPFRGGNNVLVICDTYTPQGEPLPTNKRHRAAQIFSDPKVGEQVPWFGIEQEYTLL-QKDVNWPLGWPVG--GFPGPQGPYYCAVGADKSFGRDISDAHYKACLYAGINISG 239 HSP 2 Score: 103.99 bits (258), Expect = 8.143e-22 Identity = 57/121 (47.11%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 TDK+IAEYIW+GGSG+D+RSK+RT+ PV DPS+LPKWNYDGSSTGQAPGED + F+ G + ++C T E K + + + + + +GIEQEYTLL Sbjct: 67 TDKVIAEYIWVGGSGIDIRSKSRTISKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNVLVICDTYTPQGE-PLPTNKRHRAAQIFSDPKVGEQVPWFGIEQEYTLL 186
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_ASHGO (Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 5.896e-23 Identity = 38/115 (33.04%), Postives = 55/115 (47.83%), Query Frame = 3 Query: 357 FSRDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 F DPFRRG+NI+V+ + + G P N RH AAK+F +W+ T + GW + + K + RD+V++HY+ACLYAG+ ISG Sbjct: 80 FYPDPFRRGDNIIVLAECWNNDGTPNKYNHRHEAAKLFEAHRAAD----IWFGLEQEYTLFDHNDNVYGWPKG--GFPAPQGPYYCGVGAGKVYARDVVEAHYRACLYAGLRISG 188 HSP 2 Score: 63.5438 bits (153), Expect = 5.896e-23 Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 181 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED 327 +IAEYIW+ +G +RSK RTL V +LP+WN+DGSSTGQAPG D Sbjct: 23 VIAEYIWVDSAG-HLRSKGRTLQRRVESVDELPEWNFDGSSTGQAPGHD 70
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_TUBBO (Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.899e-23 Identity = 42/113 (37.17%), Postives = 56/113 (49.56%), Query Frame = 3 Query: 366 DPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 DPFR G+NILV+ + + G P N RH AKI +H D ++PW + T + P GW + K + RDIV++HYKACL+AGI ISG Sbjct: 86 DPFRMGDNILVLAECWNADGSPNKFNHRHECAKIMEAHKD---QKPW--FGLEQEYTLFDLYGNPYGWPKG--GFPGPQGPYYCGVGTGKVYCRDIVEAHYKACLFAGIKISG 191 HSP 2 Score: 61.6178 bits (148), Expect = 5.899e-23 Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 181 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED 327 I+AEYIWI G+ +RSK +TL S LP+WN+DGSSTGQAPGED Sbjct: 26 ILAEYIWIDGAN-GVRSKTKTLFKKPSSVEDLPEWNFDGSSTGQAPGED 73
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_AGABI (Glutamine synthetase OS=Agaricus bisporus GN=glnA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 9.991e-23 Identity = 42/113 (37.17%), Postives = 57/113 (50.44%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR G+NILV+ + Y G P TN RH A K+F A+E W+ T + P GW + K + RD++++HY+ACLYAGINISG Sbjct: 81 KDPFRGGDNILVLAETYNNDGTPNRTNHRHHAKKVFDE----AKEHEPWFGLEQEYTLFDADDQPYGWPKG--GFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYAGINISG 187 HSP 2 Score: 55.4546 bits (132), Expect = 9.991e-23 Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 1 Query: 175 DKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED 327 DKI AEY+WI G G +R K T+ V+D +L W++DGSST QAPG D Sbjct: 20 DKIQAEYVWIDGDG-GLRCKTTTVSKKVTDIGQLRIWDFDGSSTNQAPGHD 69 The following BLAST results are available for this feature:
BLAST of CF417153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417153 ID=CF417153; Name=CF417153; organism=Citrus sinensis; type=EST; length=701bpback to top |