CF417160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_DICDI (Calreticulin OS=Dictyostelium discoideum GN=crtA PE=1 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 6.919e-31 Identity = 88/227 (38.77%), Postives = 117/227 (51.54%), Query Frame = 1 Query: 1 ESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVVIAPRKCMPFLPTMGQTN*SKKEV-PCETDQLTHVYTFILRPDATYSILIDNAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 ES+WV SDW K++ +G+ +TAGKW GD N KGIQTSED RFYA+SA+FP FSNK K V + + CGG Y+KLL S +++ S + V A ++ L G+ + KKE+ ETDQLTH YT ++ PD TY +L+DN E Q K + +Q G+DDIP I DP+A KP+DW Sbjct: 32 ESRWVVSDWHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDL-VLQYTVKNEQKVDCGGSYIKLL--PSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNYKGKNHLIKKEINKVETDQLTHQYTLVISPDNTYKVLVDNKEIQAGNLADDWELLPSKQIKDP-KQSKPVDWVDVKEIDDPEDVKPAGHDDIPASIVDPEAVKPEDW 254
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25 Identity = 79/229 (34.50%), Postives = 107/229 (46.72%), Query Frame = 1 Query: 7 QWVKSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVV-IAPRKCMPFLPTMGQTN*SKKEVPCETDQLTHVYTFILRPDATYSILID---NAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 +W KS WK + +AGE+ TAGKW GD DKGIQT D +F+AISA + V F + CGGGY+K++ S + S + + + RK L G+ KK++ ETDQLTHVYT +++PD TY +LID A KD + S ++ +R G+DDIP I D DAKKP+DW Sbjct: 33 RWTKSSWKVSDGSAGEFKLTAGKWYGDAEADKGIQTGPDSKFFAISAPLATVFDNTGKDTVVQFSVKHEQDLDCGGGYIKVVPATSEKQMGEFGGDTPYSIMFGPDICGYSTRKVHVILTYKGKNYLIKKDIKAETDQLTHVYTLVIKPDNTYQVLIDLKEVASGSLYEDWDMLPPKTIKDPKASKPED----WDEREEIADPEDKKPEGWDDIPATIADKDAKKPEDW 257
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_MACFU (Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.208e-20 Identity = 76/241 (31.54%), Postives = 114/241 (47.30%), Query Frame = 1 Query: 4 SQWVKSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLD-----QISVVIAPRKCMPFLPTM-------GQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQ---XXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 S+W++S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +T V F + CGGGY+KL P ++ D + +++ P C P + G+ K++ C+ D+ TH+YT I+RPD TY + IDN++ + KD S ++ +R +D P+ I DPDAKKP+DW Sbjct: 35 SRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQ-FTVKHEQNIDCGGGYVKLF-------------PNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPED----WDERAKIDDPTDSKPEDWDK-PEHIPDPDAKKPEDW 253
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_MACFA (Calreticulin OS=Macaca fascicularis GN=CALR PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.208e-20 Identity = 76/241 (31.54%), Postives = 114/241 (47.30%), Query Frame = 1 Query: 4 SQWVKSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLD-----QISVVIAPRKCMPFLPTM-------GQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQ---XXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 S+W++S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +T V F + CGGGY+KL P ++ D + +++ P C P + G+ K++ C+ D+ TH+YT I+RPD TY + IDN++ + KD S ++ +R +D P+ I DPDAKKP+DW Sbjct: 35 SRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQ-FTVKHEQNIDCGGGYVKLF-------------PNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPED----WDERAKIDDPTDSKPEDWDK-PEHIPDPDAKKPEDW 253
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_HUMAN (Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.208e-20 Identity = 76/241 (31.54%), Postives = 114/241 (47.30%), Query Frame = 1 Query: 4 SQWVKSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLD-----QISVVIAPRKCMPFLPTM-------GQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQ---XXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 S+W++S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +T V F + CGGGY+KL P ++ D + +++ P C P + G+ K++ C+ D+ TH+YT I+RPD TY + IDN++ + KD S ++ +R +D P+ I DPDAKKP+DW Sbjct: 35 SRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQ-FTVKHEQNIDCGGGYVKLF-------------PNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPED----WDERAKIDDPTDSKPEDWDK-PEHIPDPDAKKPEDW 253
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_CERAE (Calreticulin OS=Cercopithecus aethiops GN=CALR PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.208e-20 Identity = 76/241 (31.54%), Postives = 114/241 (47.30%), Query Frame = 1 Query: 4 SQWVKSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLD-----QISVVIAPRKCMPFLPTM-------GQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQ---XXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 S+W++S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +T V F + CGGGY+KL P ++ D + +++ P C P + G+ K++ C+ D+ TH+YT I+RPD TY + IDN++ + KD S ++ +R +D P+ I DPDAKKP+DW Sbjct: 35 SRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQ-FTVKHEQNIDCGGGYVKLF-------------PNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPED----WDERAKIDDPTDSKPEDWDK-PEHIPDPDAKKPEDW 253
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_MOUSE (Calreticulin OS=Mus musculus GN=Calr PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19 Identity = 77/244 (31.56%), Postives = 114/244 (46.72%), Query Frame = 1 Query: 4 SQWVKSDWKKDENTAGEWNYTAGKWNGD-PNDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQ--------ISVVIAPRKCMPFLPTM-------GQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQ---XXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 ++WV+S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA+F FSNK +T V F + CGGGY+KL S LDQ +++ P C P + G+ K++ C+ D+ TH+YT I+RPD TY + IDN++ + KD + ++ +R +D P+ I DPDAKKP+DW Sbjct: 35 NRWVESKHKSD---FGKFVLSSGKFYGDLEKDKGLQTSQDARFYALSAKFEPFSNKGQTLVVQ-FTVKHEQNIDCGGGYVKLF----------------PSGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPED----WDERAKIDDPTDSKPEDWDK-PEHIPDPDAKKPEDW 253
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_CRIGR (Calreticulin OS=Cricetulus griseus GN=CALR PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.727e-19 Identity = 75/241 (31.12%), Postives = 114/241 (47.30%), Query Frame = 1 Query: 4 SQWVKSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLD-----QISVVIAPRKCMPFLPTM-------GQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQ---XXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 ++WV+S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +T V F + CGGGY+KL P ++ D + +++ P C P + G+ K++ C+ D+ TH+YT I+RPD TY + IDN++ + KD + ++ +R +D P+ I DPDAKKP+DW Sbjct: 35 NRWVESKHKSD---FGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQ-FTVKHEQNIDCGGGYVKLF-------------PGSLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPED----WDERAKIDDPTDSKPEDWDK-PEHIPDPDAKKPEDW 253
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_RAT (Calreticulin OS=Rattus norvegicus GN=Calr PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19 Identity = 73/236 (30.93%), Postives = 113/236 (47.88%), Query Frame = 1 Query: 4 SQWVKSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVVIAPRKCMPFLPTM-------GQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQ---XXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 ++WV+S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +T V F + CGGGY+KL ++ + + +++ P C P + G+ K++ C+ D+ TH+YT I+RPD TY + IDN++ + KD + ++ +R +D P+ I DPDAKKP+DW Sbjct: 35 NRWVESKHKSD---FGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQ-FTVKHEQNIDCGGGYVKLFPGGLDQKD--------MHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPED----WDERAKIDDPTDSKPEDWDK-PEHIPDPDAKKPEDW 253
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_BOMMO (Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 72/235 (30.64%), Postives = 106/235 (45.11%), Query Frame = 1 Query: 1 ESQWVKSDWKKDENTAGEWNYTAGKWNGDP-NDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVVIAPRKCMP-------FLPTMGQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIP-KEITDPDAKKPDDW 678 ES WV S+ E G++ TAGK+ DP +DKG++TSED RFYA+S +F FSN+ K V F + CGGGY+K+ + ++ P ++ P C P G+ + KK++ C+ D TH+YT I++PD TY +LIDN + + +D +P K+I DP+AKKP+DW Sbjct: 33 ESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQ-FTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPY--------EIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVE-------------------------------------SGDLEADWDFLPNKKIKDPEAKKPEDW 219 The following BLAST results are available for this feature:
BLAST of CF417160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417160 ID=CF417160; Name=CF417160; organism=Citrus sinensis; type=EST; length=679bpback to top |