CF417162

Overview
NameCF417162
Unique NameCF417162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:682..1389. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 8.026e-48
Identity = 84/123 (68.29%), Postives = 100/123 (81.30%), Query Frame = 1
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 417
            K  KA G+KVTVIS+S +K  EAI  LGADSFLV+ D  +M+AA+GTMD IIDT+SAVH L PL+GLLK  GKL+ +G PEKPLELP F L++GRK+VGGS +GGMKETQEM+DF AKHNI A
Sbjct:  201 KIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITA 323          

HSP 2 Score: 42.743 bits (99), Expect = 8.026e-48
Identity = 19/26 (73.08%), Postives = 23/26 (88.46%), Query Frame = 2
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            DIE+I  D +NTA+ERLAK+DVRYRF
Sbjct:  324 DIELIKMDEINTAMERLAKSDVRYRF 349          
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.479e-46
Identity = 83/123 (67.48%), Postives = 101/123 (82.11%), Query Frame = 1
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 417
            KF KA G+KVTVIS+SP+K+SEAI+ LGADSFL+S D ++M+AA GTMD IIDT+SAVH L+ L+GLLK  GKLV VG P KPL+LP F L+ GRK++GGS  GG+KETQEM+DF  KHNI A
Sbjct:  193 KFGKAFGLKVTVISSSPNKESEAIDVLGADSFLLSSDPEKMKAATGTMDYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAA 315          

HSP 2 Score: 39.6614 bits (91), Expect = 1.479e-46
Identity = 17/26 (65.38%), Postives = 23/26 (88.46%), Query Frame = 2
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            +IE+I  D +NTA+ERL+KADV+YRF
Sbjct:  316 NIELIKMDEINTAIERLSKADVKYRF 341          
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 7.249e-46
Identity = 78/123 (63.41%), Postives = 98/123 (79.67%), Query Frame = 1
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 417
            KFAKA G+ VTVIS+SP K+ EA+ERLGAD+F+VS++ DEM AA GTMDGII+TVSA  P+ PL+GLLK  GK++LVG PEKP+E+P F+L+   K + GS IGGM +T EMID AAKH + A
Sbjct:  194 KFAKAFGMTVTVISSSPGKRQEALERLGADAFVVSKNADEMNAATGTMDGIINTVSANIPIAPLLGLLKPNGKMILVGLPEKPMEIPPFALVASNKTLAGSCIGGMADT-EMIDLAAKHGVTA 315          

HSP 2 Score: 48.9062 bits (115), Expect = 7.249e-46
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 2
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            +IEVI ADYVNTA+ERLAKADVRYRF
Sbjct:  316 EIEVIGADYVNTAMERLAKADVRYRF 341          
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.334e-44
Identity = 75/123 (60.98%), Postives = 96/123 (78.05%), Query Frame = 1
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 417
            KFA+A G+KVTVIS+SP KK EA+ERLGAD+F+VS   +EM+AA  TMDG+I+TVSA  P+ P + LLK  GK++LVG PE PLE+P FSL+ G + + GS IGGM +TQEMI+ AAKH + A
Sbjct:  204 KFARAFGLKVTVISSSPGKKREALERLGADAFVVSSSAEEMEAARSTMDGVINTVSANTPMAPYLALLKPNGKMILVGLPENPLEVPPFSLVHGNRTLAGSNIGGMADTQEMIELAAKHGVTA 326          

HSP 2 Score: 46.595 bits (109), Expect = 1.334e-44
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 2
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            DIEVI AD VNTA+ERLAKADVRYRF
Sbjct:  327 DIEVIGADDVNTAMERLAKADVRYRF 352          
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.847e-44
Identity = 81/121 (66.94%), Postives = 97/121 (80.17%), Query Frame = 1
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K  KA G++VTVIS S  K+ EAI+RLGADSFLV+ D  +M+ A+GTMD IIDTVSA H L+PL  LLK  GKLV +G PEKPL+LP FSL++GRK+VGGS IGGMKETQEM++F AKH I
Sbjct:  197 KIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQEMLEFCAKHKI 317          

HSP 2 Score: 37.3502 bits (85), Expect = 3.847e-44
Identity = 16/26 (61.54%), Postives = 22/26 (84.62%), Query Frame = 2
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            DIE+I    +N+A++RLAK+DVRYRF
Sbjct:  320 DIELIKMSDINSAMDRLAKSDVRYRF 345          
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.659e-42
Identity = 73/123 (59.35%), Postives = 96/123 (78.05%), Query Frame = 1
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 417
            KFA+A G++VTVISTSP K+ EA+ERLGAD F+VS +  EM+AAMGTM GII+T SA   +   + LLK +GK++LVG PEKPL++P F+L+ G KI+ GS +G + ETQEMIDFAA+H + A
Sbjct:  220 KFARAFGMRVTVISTSPVKRQEALERLGADGFIVSTNASEMKAAMGTMHGIINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVGGGKILAGSCMGSISETQEMIDFAAEHGVAA 342          

HSP 2 Score: 44.2838 bits (103), Expect = 2.659e-42
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 2
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            DIE+I AD VNTA+ERLAK DVRYRF
Sbjct:  343 DIELIGADEVNTAMERLAKGDVRYRF 368          
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 5.873e-42
Identity = 71/123 (57.72%), Postives = 95/123 (77.24%), Query Frame = 1
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 417
            KFAKA G++VTVISTSP K+ EA+E LGAD FLVSRD  +M AA GTMDGI++TVSA HP+ PL  L+K   ++V VGAP +PLELPA++++ G K + G+ +GG+++ Q M+DFA +H I A
Sbjct:  271 KFAKAFGMRVTVISTSPGKRREALEHLGADEFLVSRDAGQMAAAAGTMDGILNTVSAWHPVAPLFALMKPMAQMVFVGAPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITA 393          

HSP 2 Score: 42.743 bits (99), Expect = 5.873e-42
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 2
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            ++EVI  DYVNTA+ERL K DVRYRF
Sbjct:  394 EVEVIKMDYVNTAMERLEKNDVRYRF 419          
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 5.884e-42
Identity = 79/121 (65.29%), Postives = 95/121 (78.51%), Query Frame = 1
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K  KA G++VTVIS S  K+ EAI+RLGADSFLV+ D  +M+ A+GTMD IIDTVSA H L+PL  LLK  GKLV +G  EKPL+LP F L++GRK+VGGS IGGMKETQEM++F AKH I
Sbjct:  196 KIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKI 316          

HSP 2 Score: 35.8094 bits (81), Expect = 5.884e-42
Identity = 15/26 (57.69%), Postives = 21/26 (80.77%), Query Frame = 2
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            DIE+I    +N+A++RL K+DVRYRF
Sbjct:  319 DIELIKMSDINSAMDRLVKSDVRYRF 344          
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.302e-41
Identity = 78/123 (63.41%), Postives = 99/123 (80.49%), Query Frame = 1
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 417
            KF KA GVKVTVISTSP K++EA+ERLGAD+FL+S + ++M+AA GTMDGIIDTVSAVH L PLI LL++ G+LV VG+P KP++L  + L    K V GSMIGGM++TQEM+DFA +H + A
Sbjct:  202 KFGKAFGVKVTVISTSPWKEAEAVERLGADAFLLSTNAEQMKAAAGTMDGIIDTVSAVHDLTPLITLLRTHGQLVPVGSPGKPVQLALYPLQSDGKSVAGSMIGGMRDTQEMVDFAVEHGVAA 324          

HSP 2 Score: 35.039 bits (79), Expect = 1.302e-41
Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 2
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            ++EVI  + VN A+ERL K DVRYRF
Sbjct:  325 EVEVIGMEDVNGAMERLQKGDVRYRF 350          
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 4.880e-41
Identity = 69/123 (56.10%), Postives = 93/123 (75.61%), Query Frame = 1
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 417
            KFAKA G++VTVISTSP K+ EA+E LGAD FLVSRD  +M AA  TMDGI++TVSA HP+ PL  L+K   ++V VG P +PLELPA++++ G K + G+ +GG+++ Q M+DFA +H I A
Sbjct:  274 KFAKAFGMRVTVISTSPGKRQEALEHLGADEFLVSRDAGQMAAAAATMDGILNTVSAWHPIAPLFSLMKPMAQMVFVGGPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITA 396          

HSP 2 Score: 42.743 bits (99), Expect = 4.880e-41
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 2
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            ++EVI  DYVNTA+ERL K DVRYRF
Sbjct:  397 EVEVIKMDYVNTAMERLEKNDVRYRF 422          
The following BLAST results are available for this feature:
BLAST of CF417162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CADH9_ARATH8.026e-4868.29Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH1_STYHU1.479e-4667.48Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH5_ORYSJ7.249e-4663.41Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CADH3_ORYSJ1.334e-4460.98Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH2_ARATH3.847e-4466.94Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CADH7_ORYSJ2.659e-4259.35Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CAD8B_ORYSJ5.873e-4257.72Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH3_ARATH5.884e-4265.29Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CADH9_ORYSJ1.302e-4163.41Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CAD8C_ORYSJ4.880e-4156.10Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-092 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_B3 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417162 ID=CF417162; Name=CF417162; organism=Citrus sinensis; type=EST; length=710bp
ATGCATGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCCGTCAA
ATTCGCAAAGGCTATGGGGGTCAAGGTGACTGTGATCAGTACCTCCCCTA
GCAAGAAGAGTGAAGCCATTGAACGTCTTGGCGCTGATTCCTTTTTGGTC
AGTCGTGATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTAT
TATCGATACAGTATCTGCAGTTCACCCTCTAATGCCGTTGATTGGACTGT
TGAAATCTCAAGGAAAGCTTGTACTTGTTGGTGCACCAGAGAAGCCACTG
GAGCTACCAGCTTTCTCCCTGCTCATGGGGAGGAAGATAGTTGGTGGCAG
CATGATTGGGGGGATGAAGGAGACTCAAGAGATGATTGATTTTGCGGCAA
AACACAACATCAGAGCTGGATATTGAGGTCATACCGGCCGACTATGTGAA
CACAGCCCTGGAGCGCCTTGCTAAAGCCGATGTTAGATATCGCTTTNGTC
ATCGACGTTGCAAACACAATGAAGTCCACCCCTTAAAATTTTCTTCCTTT
TGAGTTGCGCTTAAAATGAGGAATGTGCGTTTATTGTCGAGTCACAACAT
CGTCTAAGTTTTAGATTATGTTAGTCTTTTGTTGTGATTTCAAATCTGTT
TTTGCTTTTTAAGAATAATAATTTGGTGACGTATATTCCATCTGTGTGGA
CAAATTTATG
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