CF417162

Overview
NameCF417162
Unique NameCF417162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:682..1389. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 6.374e-41
Identity = 76/121 (62.81%), Postives = 94/121 (77.69%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            KF KA G+ VTVISTSP+K+ EA E L AD+F+VS DQ +MQA   ++D IIDTV+A H L P++ LLK  GKLVLVGAPEKP+ELP+F L+ G++ V GSM GGMKETQEM+D   +HNI
Sbjct:  202 KFGKAFGLHVTVISTSPAKEREARENLKADNFVVSTDQKQMQAMTRSLDYIIDTVAATHSLGPILELLKVNGKLVLVGAPEKPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDICGEHNI 322

HSP 2 Score: 37.3502 bits (85), Expect = 6.374e-41
Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 2 
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            DIE++  D +N AL RLA+ DVRYRF
Sbjct:  325 DIEIVSTDRINDALARLARNDVRYRF 350
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.987e-39
Identity = 73/123 (59.35%), Postives = 96/123 (78.05%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 417
            KF KA G+KVTVIS+SP+K+ EA+ RLGAD+FL SRD + M AA  TMDGIIDTVSA HPL+PL+ LLK +G++V+VGAP  PL+LPA++++ G K V G+ +G + E Q M+DFA +H I A
Sbjct:  196 KFGKAFGMKVTVISSSPAKRGEALGRLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPAMPLQLPAYAIIEGGKRVAGNGVGSVAECQAMLDFAGEHGIAA 318

HSP 2 Score: 35.4242 bits (80), Expect = 1.987e-39
Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 2 
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            D+EV+  D VN AL RL + DVRYRF
Sbjct:  319 DVEVVAMDAVNAALGRLERNDVRYRF 344
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.149e-38
Identity = 75/123 (60.98%), Postives = 95/123 (77.24%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 417
            KF KA G+KVTVIS+SP+K+ EA+ERLGAD+FL SRD + M AA  TMDGIIDTVSA HPL+PL+ LLK +G++V+VGAP  PL+LPA +++ G K V GS  G + E Q M+DFA +H I A
Sbjct:  196 KFGKAFGMKVTVISSSPAKREEALERLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPAAPLQLPAIAIIDGGKRVAGSGGGSVAECQAMLDFAGEHGIAA 318

HSP 2 Score: 32.3426 bits (72), Expect = 2.149e-38
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 2 
Query:  419 DIEVIPADYVNTALERLAKADVRYRF 496
            D+EV+    VN AL RL + DVRYRF
Sbjct:  319 DVEVVAMGDVNAALGRLERNDVRYRF 344
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.415e-34
Identity = 64/121 (52.89%), Postives = 83/121 (68.60%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKAMG  VTVIS+S  KK EAI+ LGAD++LVS D  +MQ A  ++D IIDTV   HPL P + LLK  GKL+L+G    PL+  +  +++GRK + GS IG MKET+EM+DF  +  I
Sbjct:  199 KLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSSDATQMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFISPMVMLGRKAITGSFIGSMKETEEMLDFCNEKGI 319

HSP 2 Score: 40.817 bits (94), Expect = 8.415e-34
Identity = 18/25 (72.00%), Postives = 20/25 (80.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IEV+  DY+NTA ERL K DVRYRF
Sbjct:  323 IEVVKMDYINTAFERLEKNDVRYRF 347
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.416e-34
Identity = 60/121 (49.59%), Postives = 85/121 (70.25%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKA G+ VTVIS+S  KK EA+E LGAD++LVS+D ++M  A  ++D I+DT+   HPL P + LLK+ GKLV++G   +PL      L++GR+ + GS IGGM+ETQE +DF A+  +
Sbjct:  198 KIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKMMEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPPLILGRRSIAGSFIGGMEETQETLDFCAEKKV 318

HSP 2 Score: 41.2022 bits (95), Expect = 8.416e-34
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IEV+  DY+NTA+ERL K DVRYRF
Sbjct:  322 IEVVGLDYINTAMERLEKNDVRYRF 346
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.416e-34
Identity = 63/121 (52.07%), Postives = 83/121 (68.60%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKAMG  VTVIS+S  K+ EA+E LGAD +LVS D D+MQ A  ++D IIDTV   HPL P + LLK  GKL+L+G    PL+  +  +++GRK + GS IG MKET+EM+DF  +  +
Sbjct:  198 KIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEASDSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGV 318

HSP 2 Score: 41.2022 bits (95), Expect = 8.416e-34
Identity = 17/25 (68.00%), Postives = 21/25 (84.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IE++  DY+NTA+ERL K DVRYRF
Sbjct:  322 IEIVKMDYINTAMERLEKNDVRYRF 346
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.416e-34
Identity = 60/121 (49.59%), Postives = 85/121 (70.25%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKA G+ VTVIS+S  KK EA+E LGAD++LVS+D ++MQ A  ++D I+DT+   HPL P + LLK+ GKLV++G   +PL      L++GR+ + GS IG M+ETQE +DF A+  +
Sbjct:  198 KIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKV 318

HSP 2 Score: 41.5874 bits (96), Expect = 8.416e-34
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IEV+  DY+NTA+ERL K DVRYRF
Sbjct:  322 IEVVGLDYINTAMERLVKNDVRYRF 346
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.416e-34
Identity = 60/121 (49.59%), Postives = 85/121 (70.25%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKA G+ VTVIS+S  KK EA+E LGAD++LVS+D ++MQ A  ++D I+DT+   HPL P + LLK+ GKLV++G   +PL      L++GR+ + GS IG M+ETQE +DF A+  +
Sbjct:  198 KIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKV 318

HSP 2 Score: 41.5874 bits (96), Expect = 8.416e-34
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IEV+  DY+NTA+ERL K DVRYRF
Sbjct:  322 IEVVGLDYINTAMERLVKNDVRYRF 346
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.154e-33
Identity = 62/121 (51.24%), Postives = 81/121 (66.94%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKAMG  VTVIS+S  K+ EA+E LGAD +LVS D + MQ A   +D IIDTV  VHPL P + LLK  GKL+L+G    PL+     +++GRK + GS IG MKET+EM++F  +  +
Sbjct:  198 KIAKAMGHHVTVISSSDKKREEAMEHLGADEYLVSSDVESMQKAADQLDYIIDTVPVVHPLEPYLSLLKLDGKLILMGVINAPLQFVTPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGV 318

HSP 2 Score: 41.2022 bits (95), Expect = 3.154e-33
Identity = 19/25 (76.00%), Postives = 20/25 (80.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IEVI  DY+NTA ERL K DVRYRF
Sbjct:  322 IEVIKMDYINTAFERLEKNDVRYRF 346
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.154e-33
Identity = 59/121 (48.76%), Postives = 84/121 (69.42%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D I DT+  VHPL P + LLK  GKL+L G    PL+  +  +++GRK + GS IG MKET+EM++F  +  +
Sbjct:  198 KIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGL 318

HSP 2 Score: 43.1282 bits (100), Expect = 3.154e-33
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IEVI  DYVNTALERL K DVRYRF
Sbjct:  322 IEVIKMDYVNTALERLEKNDVRYRF 346
The following BLAST results are available for this feature:
BLAST of CF417162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CADH6_ORYSJ6.374e-4162.81Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CAD8D_ORYSJ1.987e-3959.35Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CAD8A_ORYSJ2.149e-3860.98Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]
CADH1_ARACO8.415e-3452.89Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH_PINTA8.416e-3449.59Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH1_TOBAC8.416e-3452.07Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH7_PICAB8.416e-3449.59Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB8.416e-3449.59Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH_POPDE3.154e-3351.24Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH_EUCGL3.154e-3348.76Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-092 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_B3 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417162 ID=CF417162; Name=CF417162; organism=Citrus sinensis; type=EST; length=710bp
ATGCATGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCCGTCAA
ATTCGCAAAGGCTATGGGGGTCAAGGTGACTGTGATCAGTACCTCCCCTA
GCAAGAAGAGTGAAGCCATTGAACGTCTTGGCGCTGATTCCTTTTTGGTC
AGTCGTGATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTAT
TATCGATACAGTATCTGCAGTTCACCCTCTAATGCCGTTGATTGGACTGT
TGAAATCTCAAGGAAAGCTTGTACTTGTTGGTGCACCAGAGAAGCCACTG
GAGCTACCAGCTTTCTCCCTGCTCATGGGGAGGAAGATAGTTGGTGGCAG
CATGATTGGGGGGATGAAGGAGACTCAAGAGATGATTGATTTTGCGGCAA
AACACAACATCAGAGCTGGATATTGAGGTCATACCGGCCGACTATGTGAA
CACAGCCCTGGAGCGCCTTGCTAAAGCCGATGTTAGATATCGCTTTNGTC
ATCGACGTTGCAAACACAATGAAGTCCACCCCTTAAAATTTTCTTCCTTT
TGAGTTGCGCTTAAAATGAGGAATGTGCGTTTATTGTCGAGTCACAACAT
CGTCTAAGTTTTAGATTATGTTAGTCTTTTGTTGTGATTTCAAATCTGTT
TTTGCTTTTTAAGAATAATAATTTGGTGACGTATATTCCATCTGTGTGGA
CAAATTTATG
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